Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0410 |
Symbol | |
ID | 5205481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 501751 |
End bp | 502437 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640598624 |
Product | GTP cyclohydrolase II |
Protein accession | YP_001279315 |
Protein GI | 148652222 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0807] GTP cyclohydrolase II |
TIGRFAM ID | [TIGR00505] GTP cyclohydrolase II |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0177534 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTCAAC TACCTTCAAC AAACGAAACT CACTCTCCTT ATAAATTCAT CAGTAAAGCC CGTCTCCCAA CGGCGCATGG TCAATTTGAT ATCCACGTGT TTGAGAATGC AGAAGGCCAA GAGCATGTTA TGCTCACTTG CGGCTTGCCG ACTGATAACA CTGATGATGT AGCCAATAAA GAGAAACTAC CACCTTTGGT GCGTATCCAT TCTGAGTGTC TAACTGGTGA TGCTTTTTCC TCTTTAAAAT GTGACTGCGG TCCCCAGCTA AATGCAACGA TGCAGGCCAT ACAACAAGAA GGATGTGGCG CTATTTTGTA TTTGCGTCAA GAGGGGCGCG GTATTGGACT GACCAATAAA ATCCGAGCTT ATGCGCTACA AGATCAAGGG CACGATACAC TCGATGCCAA CCTGTTGCTT GGCCTACCCG CTGATGCCAG AACGTATGAA ATGTGTAAGC CCATGCTCGA TCATGTGGGC ATCAGCAAGC TGCGTCTTAT GACCAACAAT CCAGATAAAC TCAGCTATCT AGAAGACTTA GGCTTTGAGG TGGTGGAGCG TATTCCGCTA GTAGTGGGAC TTAATCCTTT TAATGTGGAT TATTTGGCCA CCAAGCGTGA GCGCATGGGT CATCATTTGA ACAATGACAT CTCCTCTTTA GTATTTAAGC CCATCTCGGA GCAATAA
|
Protein sequence | MSQLPSTNET HSPYKFISKA RLPTAHGQFD IHVFENAEGQ EHVMLTCGLP TDNTDDVANK EKLPPLVRIH SECLTGDAFS SLKCDCGPQL NATMQAIQQE GCGAILYLRQ EGRGIGLTNK IRAYALQDQG HDTLDANLLL GLPADARTYE MCKPMLDHVG ISKLRLMTNN PDKLSYLEDL GFEVVERIPL VVGLNPFNVD YLATKRERMG HHLNNDISSL VFKPISEQ
|
| |