Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0401 |
Symbol | aroB |
ID | 5204767 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 487825 |
End bp | 488925 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640598615 |
Product | 3-dehydroquinate synthase |
Protein accession | YP_001279306 |
Protein GI | 148652213 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0337] 3-dehydroquinate synthetase |
TIGRFAM ID | [TIGR01357] 3-dehydroquinate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00294823 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGATGTTG AGAGTCTTAT GAAAGCAAAT TTAGTCGTCC ACACCCAAAG CCATGATTAT CCCATCATTA TCACCAGTCA GTGTGATATG GCCAAAGAAA TTGCGCCTTA TATCAAGGGC AAACAAGTGA TGATAGTCAC CAACACCACA GTTGAAAAGC TGTATCTAGC AGACTTGGCT GCGGGGCTAA AAGAGGACTT TGAGGTAATG AGTGTGGTGC TACCAGACGG TGAGCAATAC AAGACTCAGC AGTATATTGA TACCATTTAT GACGCCTTGA TGGACAACCA CTGCAGCCGT GACGTGACCT TGGTGGCCTT AGGCGGTGGG GTGATTGGCG ATATGACCGG CTTTGCTGCG GCAAGCTTTA TGCGCGGGGT GAACTTTATC CAAATCCCAA CCACCTTATT GTCTCAAGTG GATTCTAGTG TGGGCGGTAA AACAGGCATT AATCATCCAA AGGGTAAGAA CATGATTGGC GCCTTTTGGC AGCCGCAAAT GGTGCTGGCT GATATGCACA CCTTGACCAC CTTGCCCCAG CGTGAGTTGT CAGCGGGTAT GGCTGAGGTG ATCAAATATG CGCTGATTAT GGACGAGACG TTTTTAGATT GGTTAGAGGA CAATATGGCC GCTTTAATGG GGCTTGATAA AGTGGTATTG GCAGAAGCGG TGGCGCGCTG TTGTCAGTAC AAGGCCGATA TCGTGGCACA AGATGAGCGC GAAGCGGGTA AGCGGGCACT GCTAAACTTT GGTCATACCT TCGGTCATGT GATTGAGACC CATGAGGGCT ATGGTCAGTG GCTGCACGGC GAGGCAGTGG CTGCCGGAAT GGTGCAGGCC GCTCAGCTGT CGCATAAGAT GGGCTGGATA AGTGAGGCGC AGCTGCAGCG TATCTGTGCG GTGTTGATAT CGGCCAAGCT GCCCACACAG CCGCCTAGCA TAGATACCCA AATTGCCCTT GACTTAATGC AACACGATAA AAAAGTTAAG TCAGGACAAG TTAGGCTGAT TTTGTTAAAA TCAGTGGGTG ATGCCGTCGT TACTGCTGAC TTTGAGCCTA AGCTGCTTGA AGAGGTGCTT GCAAGCTGCG TACCTAATTA A
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Protein sequence | MDVESLMKAN LVVHTQSHDY PIIITSQCDM AKEIAPYIKG KQVMIVTNTT VEKLYLADLA AGLKEDFEVM SVVLPDGEQY KTQQYIDTIY DALMDNHCSR DVTLVALGGG VIGDMTGFAA ASFMRGVNFI QIPTTLLSQV DSSVGGKTGI NHPKGKNMIG AFWQPQMVLA DMHTLTTLPQ RELSAGMAEV IKYALIMDET FLDWLEDNMA ALMGLDKVVL AEAVARCCQY KADIVAQDER EAGKRALLNF GHTFGHVIET HEGYGQWLHG EAVAAGMVQA AQLSHKMGWI SEAQLQRICA VLISAKLPTQ PPSIDTQIAL DLMQHDKKVK SGQVRLILLK SVGDAVVTAD FEPKLLEEVL ASCVPN
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