Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0315 |
Symbol | |
ID | 5204889 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 376938 |
End bp | 379145 |
Gene Length | 2208 bp |
Protein Length | 735 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640598525 |
Product | carboxyl-terminal protease |
Protein accession | YP_001279220 |
Protein GI | 148652127 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000144056 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0000288236 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGATTTC AACCAACCCA GCTGGTGTTA AGTGCCGCCG CCATTGGTAT GGCCGGTGTG GTGTTATCAC ACAGCTATAG CTCTGCTGTG GCTGCGGATA AAAGCGCCTT TGTTGCCACA CCCGAGCAAA AGCTTACCAC ACGCCAAGTA GCCGCTTTAT TAGACAGAGC GCATTATTCC AATAAGCGCT TTGATGAGGC GATGGGCCGT AAAGTGTTGG ATATGTATTT TGACCGTTTG GACCCCAATC ATACTCTATT TTTGCAATCA GATATTAATG AATTAACCAC CAAATACGGT GCAACTTTTG CCGATAGATT AAAGCAGGGC GATCTCAGCG CAGTACAGGC AATTTTTAAT CGTTATACCC AGCGATCAAA TGAGTACTAT AACTTCGCCG ATAAGTTCTT AAGTAAGCCT GTCAATCTTA ATCGCAATGA TTCTGTGGTG CTTGACCGTG AAAAAGAACC CCGCTTTAAG AGTGCTTCAG AGCAACAAGG CTATTGGGGC CGTCAATTAA CTTTGCAGAT TATCAATCTA ACTTTAGGTC AAGAAGAAGA CAAGGCTCGT GATGAGCTGT ATACCAAAAA CCCTGAGCTG ACCAAAGGTA ACGACTTAAT CTTAGGAGAG GACAGAAGCC CGCAAGAGAT TTTGTTAAAT CGTTTGCATC GTCAGCAAGA GCAGCTACAG CGCATTAAGA GCGATGAGAT CATGGAGTCG GTGCTAAATA CAGCCACCTT AACTTATGAT CCGCACAGCA ACTATTATGC CCCTGTGCAA TCGGTCGAGA TGCAAGTGCA GTCCAACTTG CAATTAGAAG GTATTGGCGT GTCTATTCGC CCTTATCGTA AAAACCCAGA TTATACCCAG ATTGTGACCT TGGTTGATGG TGGACCCGCT GCCAAATCAG GCAAAGTGCA GCCCAATGAT TTGATCATGG CTGTGGCCAA AGATGGCGAG AATATGCAAG ATGTGGTGGG CTGGTCAACT CGTGAAGTGG TGGCCTTAAT CCGCGGCAAA CGTGGCACAG ATGTGACCAT CAAAGTTAAG CAGCCCAATA GTCCTGATGC CTCAGCACGT ACCATTGTCA TCACCCGTGA TGTGATTGAG CAAGAAGATG CGGGCGTGAC TCATCGGGTG ATTACGGTAA AACCTGAAGG CAGCACGGAA GAAAAACGCA TCGGTGTGCT TGAAATACCA AGCTTCTATC TAAACTATCA AGCCCGCCGC AGTGGTCAAA ACTACCGCAG CGTGAGTATC GACACTCAAA AAGAGCTTGA GAAGCTTGAT AAAGAAAACA TTGACGGCCT GGTGGTCGAT CTACGCAATA ACCCTGGCGG CTCCTTAGAT GAAGTGGCTA AAATGCTGGG ATTATTTATT AAAGAAGGGC CGCTGGTTCA GATTCGTGAC AACCAGGGTA ACGTGCAAGT CTATCAAGAC GAAGATGGTG GTAAGCAGCT GTATTCAGGC GATATGGTGG TCATTACCAA TATGGCATCA GCCTCTGCCT CTGAGATTTT CGCCGCTGCC ATTCAAGACT ATGGCCGCGG CTTAGTAGTG GGTAGTACCA CCACCGGTAA GGGCTCAGCT CAGATTCAGT TAGATAGTCT GGCCTTAGGC TCAGCCACGT TGACTCAGCG TAAGTTTTAT CGCATTACAG GCGGCAGTAC CCAGAATAAA GGGGTAGTGC CTGATGTGTC TTTAGTCAAT ATCTATGAAG GTGCTGAATT TAGTGAGCGC GACCAAAAAA ATGCCATGGC TTGGGATACC ATCAAGACCT CGCCTTATAA GCCTGAAGGC AAATTTAGCA GTAAGACGTT AGCGACCTTA AATCAGCAGT CCAAGATTCG TCAAACCACC AATCCGCAGT TTGTTTATCT AGATACGCTA AATAAATTAC GCAATATGGA AGATGACAAA AATGCGGTTA AGCTAAATAT CACTGAGCGC CGCGCACATC AAAAACAGAT TGAGCAAAAA ACTTTAGATG CAGAAAATGC ACGTCGTAAG GCCACCGGTC AAAAGCCTTA TGCCAGCTGG ACTGAGTATC AAGCTGCTGT CGAAGCCATG TTCGAAGAGC GCAGTCGTCT AAAAAATGAT GAGCGTCCTA AGCTACCAGA AGAAGAGGCA TACGTGATTG AAGCGGCCAA GCTGATGCTT GATGCCCGTA AGCTGCAAAA GTTCGATGAG CTACGCAGCG CCAAGTAG
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Protein sequence | MRFQPTQLVL SAAAIGMAGV VLSHSYSSAV AADKSAFVAT PEQKLTTRQV AALLDRAHYS NKRFDEAMGR KVLDMYFDRL DPNHTLFLQS DINELTTKYG ATFADRLKQG DLSAVQAIFN RYTQRSNEYY NFADKFLSKP VNLNRNDSVV LDREKEPRFK SASEQQGYWG RQLTLQIINL TLGQEEDKAR DELYTKNPEL TKGNDLILGE DRSPQEILLN RLHRQQEQLQ RIKSDEIMES VLNTATLTYD PHSNYYAPVQ SVEMQVQSNL QLEGIGVSIR PYRKNPDYTQ IVTLVDGGPA AKSGKVQPND LIMAVAKDGE NMQDVVGWST REVVALIRGK RGTDVTIKVK QPNSPDASAR TIVITRDVIE QEDAGVTHRV ITVKPEGSTE EKRIGVLEIP SFYLNYQARR SGQNYRSVSI DTQKELEKLD KENIDGLVVD LRNNPGGSLD EVAKMLGLFI KEGPLVQIRD NQGNVQVYQD EDGGKQLYSG DMVVITNMAS ASASEIFAAA IQDYGRGLVV GSTTTGKGSA QIQLDSLALG SATLTQRKFY RITGGSTQNK GVVPDVSLVN IYEGAEFSER DQKNAMAWDT IKTSPYKPEG KFSSKTLATL NQQSKIRQTT NPQFVYLDTL NKLRNMEDDK NAVKLNITER RAHQKQIEQK TLDAENARRK ATGQKPYASW TEYQAAVEAM FEERSRLKND ERPKLPEEEA YVIEAAKLML DARKLQKFDE LRSAK
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