| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0281 |
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| Symbol | |
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| ID | 5204896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 333983 |
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| End bp | 335491 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640598491 |
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| Product | amino acid carrier protein |
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| Protein accession | YP_001279186 |
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| Protein GI | 148652093 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1115] Na+/alanine symporter |
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| TIGRFAM ID | [TIGR00835] amino acid carrier protein
[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000471022 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGGAAT CAACGAACGT CTTCGCAGAA GGCTTTAATG CGTTTGTAAG TTGGGGAAAT
GGGATTATCT GGGGTAATGA CTCTTGGCTA ATCATGGACA ACCCCTGGTA TGGTTTATTA
ATTTTTATTC TAATTGGTGC CGGTATCTTT TTTACCATTG CCACCCGATT TGTACAGTTT
CGTCAGTTTG GTCACATGTG GAATCTACTG CGTAGCTCAG GTCAGGGCCG TAAAGATGGG
GGGATTAGCT CATTTGAAGC CTTAATGACC TCACTGGCCG CTCGTGTGGG TACGGGTAAC
TTAGCGGGTG TGGCCATTGC CGTCTATATC GGTGGTCCAG GTGCGGTATT TTGGATGTGG
ATTACTGCAA TTTTGGGGAT GTCGACCAGC TTTATTGAAT CGACCTTGGC GCAGGCTTAT
AAAGTGCCAC ACAATGATAA TGTGTATCGC GGTGGTCCAG CTTACTATAT CGAAAAAGGC
TTGGGTCAGC GCTGGATGGC GATCTTCTTC TCATTATGTT TGTTGGTGGC CTTTGGTCTG
GCCTTCAATG GCGTACAAGC CAACACCATC GCTCAAGCCA CGCATCAAGC GTTCGGTGCA
CCAACCTGGT TGACCGGTCT GGTATTGGTG GTGTTGGTCG CGCCGGTGGT CTTCGGTGGT
CTTCGTTCAG TGGCGCGTGT GGCAGGTAAA GTGGTACCAG TAATGGCCAT CTTATATGTG
CTATTGGCGC TGTTTATTAT TGTGACTAAT TTTAGTCAGT TCCCAGCTGC CATTGCCCTA
ATCGTCAAAT CTGCCTTCGG TTTAGAACAA GCCGCTGGCG GGGTACTTGG CTATGGTATC
GCTCAAGCAA TGATTAACGG TATCAAACGT GGTCTGTTCT CAAATGAGGC GGGTATGGGT
TCTGCACCAA ACGCAGCAGC AACGGCCAAG AGTCATCCTG ATCACCCTGC CGTACAAGGC
TTTATGCAAA TGCTGGGTGT GTTTATCGAT ACCTTGGTTA TTTGTACCGC TACCGCATCG
ATTATTATCT TATCGGGCGT TGTGAATGAT CCCAATGTTG AGCAAGAAGG TATTAAACTC
ACTCAGCTGG CCTTATCTCA ATATGTGGGC GACTCAGGTA TTTACTTTAT TGCAGTGGCT
ATTTTCTTCT TTGCCTTTAC CTCTATCATT GCCAACTACA GCTATGGTGA GTCAAACTTA
GAGTTCATAT CTGGTGAAAA AAGTGCTAAG TCTGCGATTA TGATTTTCCG CTTTATGGTA
TTGGCCATGG TATTTATTGG CTCAGTGGCC AGCTTGCCTG CCATCTGGAA CTTTGCTGAT
TTATCTATGG GTTTAATGGC CTTAACCAAC TTGGTGGCGA TCATCATCTT ATCACCTGTG
GCACTGCGCG TATTACGTGA CTATGAGCGC CAGGTAAAAG AGGGTAAGAC CCCTGATCAA
ATCACCTTTG ATCCAGATCA ATTTGTGAAG TTAAAAGATG AAGCCAACCG TGATGCGTGG
AAGGATTAA
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| Protein sequence | MVESTNVFAE GFNAFVSWGN GIIWGNDSWL IMDNPWYGLL IFILIGAGIF FTIATRFVQF
RQFGHMWNLL RSSGQGRKDG GISSFEALMT SLAARVGTGN LAGVAIAVYI GGPGAVFWMW
ITAILGMSTS FIESTLAQAY KVPHNDNVYR GGPAYYIEKG LGQRWMAIFF SLCLLVAFGL
AFNGVQANTI AQATHQAFGA PTWLTGLVLV VLVAPVVFGG LRSVARVAGK VVPVMAILYV
LLALFIIVTN FSQFPAAIAL IVKSAFGLEQ AAGGVLGYGI AQAMINGIKR GLFSNEAGMG
SAPNAAATAK SHPDHPAVQG FMQMLGVFID TLVICTATAS IIILSGVVND PNVEQEGIKL
TQLALSQYVG DSGIYFIAVA IFFFAFTSII ANYSYGESNL EFISGEKSAK SAIMIFRFMV
LAMVFIGSVA SLPAIWNFAD LSMGLMALTN LVAIIILSPV ALRVLRDYER QVKEGKTPDQ
ITFDPDQFVK LKDEANRDAW KD
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