| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0267 |
|---|
| Symbol | |
|---|
| ID | 5206739 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | + |
|---|
| Start bp | 316529 |
|---|
| End bp | 317758 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640598477 |
|---|
| Product | 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase |
|---|
| Protein accession | YP_001279172 |
|---|
| Protein GI | 148652079 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
|---|
| TIGRFAM ID | [TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGAAA TTAAAGCGCC CGTATTCCCA GAGTCAGTTG CTGACGGTAC CATCGTAGAA
TGGCACGTAA GCGAAGGCGA ACAAGTTAAC CGTGATGACA TTTTAGCTGA AATCGAAACA
GATAAAGTGG TCTTAGAAGT GGTTGCTCCA GATGACGGTG TGGTAACTAA AATTGTTAAG
CAAGTAGACG ACACTGTGTT GTCTGACGAG CTAATCGCTG AATTTGAAGC TGGTGCAACA
GGCAGCGCTG CTGGTGCTTC TGAAGACAAA GCAGAAGAAA GCAGTGACAC GGCTACTGAA
GAAAAACCAG CAGCTAAGCC TGCCGCAAGC GCTGACAGCG CCGATGATCA TAAAGATCAA
AGCCCAGCGG TTCGTAAAGC AGCCAAAGAG TCTGGTGTAG ATCCTAAAAA TGTAGAAGGC
ACAGGCCGTG GCGGTCGTGT GACTAAGCAA GATATGGCCA GCCCAACACT GAAAGCGGAT
AGCTCTATCA AGTCTGACAG TGGCCGTCCT GTCGCAGAAT CAGTAGGTGA GCGTACTGAA
AAACGCGTGC CTATGACTCG TCTACGTAAG ACTGTGGCCA ACCGTCTGTT AGCCGCTTCT
CAAGAAACTG CGATGTTGAC CACGTTCAAC GAAGTGAATA TGAAGCCTCT AATGGATCTA
CGTGCTAAGT ACAAAGATCA GTTTGAAAAA CGTCACGGCA CTCGTCTAGG CTTTATGTCT
ATGTTCGTTA AAGCCGCTAC CGAAGCACTA AAACGCTTCC CAGCTGTTAA CGCGTCAATC
GACGGTGATG ACATCGTTTA TCACGGTTAC TATGACGTTG GTGTTGCGGT ATCTTCAGAC
CGTGGTCTAG TGGTGCCTGT ACTACGTGAT ACAGATCGTA TGAGCATGGC AGACATCGAA
GGCGGCATCC GCGACTTCGC TGGTAAAGCC CGTGATGGTA AATTATCACT ACAAGAGATG
ACAGGTGGTA CCTTCACGAT CACTAACGGT GGTGTATTTG GTTCATTAAT GTCAACGCCT
ATCTTGAACC CACCCCAAAC TGCCATCTTA GGTATGCACG CGATCAATGA GCGCCCAATG
GCGGTTAATG GTCAAGTTGA GATCCTACCT ATGATGTATC TAGCGTTATC ATACGATCAC
CGTATGATTG ATGGTAAAGA TGCGGTACAG TTCTTAGTCA CCATCAAGCA GTTGGTTGAA
GACCCAGCAA TGCTACTACT TGACCTATAA
|
|---|
| Protein sequence | MAEIKAPVFP ESVADGTIVE WHVSEGEQVN RDDILAEIET DKVVLEVVAP DDGVVTKIVK
QVDDTVLSDE LIAEFEAGAT GSAAGASEDK AEESSDTATE EKPAAKPAAS ADSADDHKDQ
SPAVRKAAKE SGVDPKNVEG TGRGGRVTKQ DMASPTLKAD SSIKSDSGRP VAESVGERTE
KRVPMTRLRK TVANRLLAAS QETAMLTTFN EVNMKPLMDL RAKYKDQFEK RHGTRLGFMS
MFVKAATEAL KRFPAVNASI DGDDIVYHGY YDVGVAVSSD RGLVVPVLRD TDRMSMADIE
GGIRDFAGKA RDGKLSLQEM TGGTFTITNG GVFGSLMSTP ILNPPQTAIL GMHAINERPM
AVNGQVEILP MMYLALSYDH RMIDGKDAVQ FLVTIKQLVE DPAMLLLDL
|
|---|
| |