Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0245 |
Symbol | |
ID | 5206071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 285617 |
End bp | 286690 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640598455 |
Product | DegT/DnrJ/EryC1/StrS aminotransferase |
Protein accession | YP_001279150 |
Protein GI | 148652057 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.4037 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAATTCA TCGATTTAGC AGCACAGCAA GAGCGTATTA AAGACAAACT GCAAGCAAAT ATTCAAAAAG TATTGGCACA TGGTAAATAT ATTTTAGGTC CTGAGGTTCA CGAGCTTGAA GAAAAGCTTG CTGAATATAC AGGTGCCAAA TACTGTATCA CCTGTGCTAA TGGCACAGAT GCGCTACAAA TTGCGCTTAT GTCATTAGGT ATTGGCCCTG GCGACGAAGT AATCACTCCA GGATTTACCT ATATTGCGAC TGCTGAAACG GTAGCCTTGC TAGGCGCCAC GCCTGTCTAT ATTGATATTG ACGCAAAAAC TTACAACTTA GATCCAAGCC TATTGGAAGC AGCAATCACT TCTCGTACTA AAGCCATCAT ACCTGTTAGC TTATACGGCC AATGTGCAGA TTTTGATACG ATTAATCAAA TTGCAGAGAA GCACAATCTA CCAGTTATTG AAGATGCGGC ACAAAGCTTT GGGGCTACTT ATAAAGGTAA GAAGTCTTGC AACCTATCTA CTATCGCCTG CACCAGCTTT TTCCCAAGCA AGCCATTAGG TTGCTATGGT GATGGCGGTG CGATTTTCAC CAACGATGAA GAGCTAGCAA CCGTCATCCG CCAAATTGCA CGTCATGGAC AAGATCGCCG CTATCACCAT ATCCGTATTG GCGTGAACAG CCGTCTTGAT ACCTTGCAGG CAGCAATCTT ACTACCTAAA CTAGAAATTC TAGATGATGA GATGCAAGCA CGTCGTCAAG TGGCAGCTAC TTATACTAAG CTACTTAATG AAGCAGGTAT TACCACGACT CCTATGATCG AATCACATAA TCAAAGCGCT TGGGCTCAAT ATACCATTCA AGTTGACAAT CGTGATCAAG TACAAGGAAA GCTTAAGGAA CAAGGTATCC CGACAGCAGT CCACTACCCT ATCCCACTTA ATAAGCAACC TGCAGTTGCC AGTGATGCTA AGCTAGCCGT AGGTGATGAA GTTGCTAAAA AGGTTATGAG TCTACCAATG TATCCCTATT TAGATAATAC AAGCATTGAG ACTATTGTTA ATAGTTTGAG GTAG
|
Protein sequence | MQFIDLAAQQ ERIKDKLQAN IQKVLAHGKY ILGPEVHELE EKLAEYTGAK YCITCANGTD ALQIALMSLG IGPGDEVITP GFTYIATAET VALLGATPVY IDIDAKTYNL DPSLLEAAIT SRTKAIIPVS LYGQCADFDT INQIAEKHNL PVIEDAAQSF GATYKGKKSC NLSTIACTSF FPSKPLGCYG DGGAIFTNDE ELATVIRQIA RHGQDRRYHH IRIGVNSRLD TLQAAILLPK LEILDDEMQA RRQVAATYTK LLNEAGITTT PMIESHNQSA WAQYTIQVDN RDQVQGKLKE QGIPTAVHYP IPLNKQPAVA SDAKLAVGDE VAKKVMSLPM YPYLDNTSIE TIVNSLR
|
| |