Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0212 |
Symbol | |
ID | 5205776 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 249034 |
End bp | 249837 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640598424 |
Product | peptidase M48, Ste24p |
Protein accession | YP_001279121 |
Protein GI | 148652028 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000330567 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.366898 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAACT TTTTAATTCG CAGCACCCTT GCCGCCTCTT TATCGGTTAT GGCACTAACC GGCTGTAGCT CAACCACCAA TTCAGGCCTT ATCGGCAGTG ACCGTCAGCA GCTGTTATTG GTCTCAAGCG ATCAAGTACT ACAAATGTCA GCGCAAAGTT ACAATCAGCT GCTGCAAGAA GCAAGCAAAC AAAAAGTACT CGATACCAAT GCCGCCCAGC TTGCCCGCCT AAACAGCATT GCACGTAAGC TCATTCCACA AGCAGAAGCT TACCGCGGTG ATGCCAAAAA TTGGCAGTGG GAAGTGCATA CCATTAACTC ACCTGAGTTG AACGCTTTTG TATTACCCGG TGGTAAAATC ATGTTTTACT CAGGCATTAT CGATAAGCTA AAGCTGACTG ATGCTGAGAT TGCCGCCATT ATGGGCCACG AAATGGCACA CGCCTTACGT GAACATGCCC GTGAGCGTAT GTCGAGTCAA TATGCTACGC AGACCGGCAT TGGCCTTGCC GCCAGTATCT TTGGTCTATC ACAAGGTCAA GCTGAGCTGG CCAATATTGC CGGTGACCTA GGTATTGCCC GTCCTCACAG CCGCACCCAA GAGTCAGAAG CGGATCAGAT CGGTCTGGTG CTGATGGCCA AAGCTGGCTA TGATCCAAAT GCGGCCATCA GCCTATGGAA AAAAATGCAG GCAGCCAGCC AAGGCGAGCC ACCACAATTC TTAAGCACTC ACCCTTCAAG CTCTAGCCGT ATTGCTACCT TGCAAGCGCT TATCCCCCAA GTGATGCCTT ACTACAAAAA GTAA
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Protein sequence | MKNFLIRSTL AASLSVMALT GCSSTTNSGL IGSDRQQLLL VSSDQVLQMS AQSYNQLLQE ASKQKVLDTN AAQLARLNSI ARKLIPQAEA YRGDAKNWQW EVHTINSPEL NAFVLPGGKI MFYSGIIDKL KLTDAEIAAI MGHEMAHALR EHARERMSSQ YATQTGIGLA ASIFGLSQGQ AELANIAGDL GIARPHSRTQ ESEADQIGLV LMAKAGYDPN AAISLWKKMQ AASQGEPPQF LSTHPSSSSR IATLQALIPQ VMPYYKK
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