Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0184 |
Symbol | |
ID | 5204572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 220278 |
End bp | 220856 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640598396 |
Product | ferric uptake regulator family protein |
Protein accession | YP_001279093 |
Protein GI | 148652000 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0735] Fe2+/Zn2+ uptake regulation proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0654518 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00635481 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCGTAT CTAGTAATGC CCCTGACGCA GTAATTAGCG CCCCCTGTGA CCATCATGGC CCACACTTGC ATGATGTGCA TGCTTTAACT CAAGCCGAGA TTGAGAATCG GCTATTGGCT GCTGAGCAAC TTTGTGCGAC TAAAGGCGCC CGTTTTACAC CCTTAAGACG CACCGTTTAT CAGCTGATTT TGCAATCTGA TAAGCCGCTT GGTGCTTATG ACTTAATCCA AAGCCTGCAA GACAGCCGCG CCCAAGATCA AGCCAATAAA GCCAAGATGG TGGCGCCGCC GACCATTTAT CGAACCTTAG AGTTTTTGTT AGAATTCGGC TTTATTCATC AATTGACCTC ACTGAATGCC TTTGTACCCT GTTGCCATCC CCGCGATGAG CACAATGCCG TATTCTTATT ATGCAATGAC TGTCAGCGGG TACAAGAATG TAGCGGCATG CCCGTTCAGG AGATTTCAAG CTACGTGAAG CAGCAAGTTG GCTTTGAGGT CAAACAAAGC GTGATGGAGC TTAAAGGGTT ATGCCATACC TGCTCGCCAA GCCTAGCCGA TGCGGTAGTG CAAGGATAG
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Protein sequence | MSVSSNAPDA VISAPCDHHG PHLHDVHALT QAEIENRLLA AEQLCATKGA RFTPLRRTVY QLILQSDKPL GAYDLIQSLQ DSRAQDQANK AKMVAPPTIY RTLEFLLEFG FIHQLTSLNA FVPCCHPRDE HNAVFLLCND CQRVQECSGM PVQEISSYVK QQVGFEVKQS VMELKGLCHT CSPSLADAVV QG
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