Gene PsycPRwf_0183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0183 
Symbol 
ID5204571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp219327 
End bp220154 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content50% 
IMG OID640598395 
ProductABC transporter related 
Protein accessionYP_001279092 
Protein GI148651999 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1121] ABC-type Mn/Zn transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00385632 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00108332 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGGACAACG TAGGCTTTAG CATTAGCGGC CGAGGCTTAG ATAGACAAGA AGGTGTCTCT 
GAGCCGGCCA AAGGCAAACT CTCCGGCTGG CTTAAAGGTG CCCGCTCTGC CAAAGCTAAG
TCCTTAGCAC TGGCTGATGA CCCAGCACAA AAGGTGCTAC TAAGCAATAT CAGTCTTAGT
ATTGAGCGCG GTGAGAAAAT CAGCGTCATC GGCCCCAACG GCGCTGGCAA GTCCACCTTA
ATGAAGCTTA TTTTGGGACT ATTGACACCC ACTTCAGGAC ACATCAAACG CCATCCTAAG
CTTGAGATTG GCTATGTACC CCAGAAATTT AGCATACCCG CCATACTGCC GCTACGAGTG
CAAGACTTAT TGTCACAGAC CAAAAACCGG CTGACTGCTG AGCAGCAGGC CTTTTTGTAT
CAGCGTCTGT CCGTTACGCC ACTTCTTAAG AAGCAAGTTA TTCATCTGTC AGGCGGTGAG
ACCCAGCGTA TTTTGCTGGC ACGCTCATTG CTCAGTAAAC CCGACCTGCT TATCTTAGAT
GAGCCGATGC AAGGCTTAGA TCCTGAAAGC GAGCGCTGGC TGTATGAGTT TATCGATGAC
TTACCGCCTT TTTTGCAGTG TGCCATGGTG GTGGTCTCCC ATGATTTACA CTGGGTGATG
CGCGGCAGTC GCCGAGTCAT TTGTCTCAAT AAACACATCT GCTGTGAAGG GCAGCCCAGC
GACTTGGGCG TATCTCAAGA ATTCAAAAAG CTTTTCGGTC ATCAATACGA GCAGCCCTAT
ATTCATCAGC CGCACGAGTG TCAGCATCAT GCACCGCATG AGCATTGA
 
Protein sequence
MDNVGFSISG RGLDRQEGVS EPAKGKLSGW LKGARSAKAK SLALADDPAQ KVLLSNISLS 
IERGEKISVI GPNGAGKSTL MKLILGLLTP TSGHIKRHPK LEIGYVPQKF SIPAILPLRV
QDLLSQTKNR LTAEQQAFLY QRLSVTPLLK KQVIHLSGGE TQRILLARSL LSKPDLLILD
EPMQGLDPES ERWLYEFIDD LPPFLQCAMV VVSHDLHWVM RGSRRVICLN KHICCEGQPS
DLGVSQEFKK LFGHQYEQPY IHQPHECQHH APHEH