Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0183 |
Symbol | |
ID | 5204571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 219327 |
End bp | 220154 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640598395 |
Product | ABC transporter related |
Protein accession | YP_001279092 |
Protein GI | 148651999 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00385632 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00108332 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGGACAACG TAGGCTTTAG CATTAGCGGC CGAGGCTTAG ATAGACAAGA AGGTGTCTCT GAGCCGGCCA AAGGCAAACT CTCCGGCTGG CTTAAAGGTG CCCGCTCTGC CAAAGCTAAG TCCTTAGCAC TGGCTGATGA CCCAGCACAA AAGGTGCTAC TAAGCAATAT CAGTCTTAGT ATTGAGCGCG GTGAGAAAAT CAGCGTCATC GGCCCCAACG GCGCTGGCAA GTCCACCTTA ATGAAGCTTA TTTTGGGACT ATTGACACCC ACTTCAGGAC ACATCAAACG CCATCCTAAG CTTGAGATTG GCTATGTACC CCAGAAATTT AGCATACCCG CCATACTGCC GCTACGAGTG CAAGACTTAT TGTCACAGAC CAAAAACCGG CTGACTGCTG AGCAGCAGGC CTTTTTGTAT CAGCGTCTGT CCGTTACGCC ACTTCTTAAG AAGCAAGTTA TTCATCTGTC AGGCGGTGAG ACCCAGCGTA TTTTGCTGGC ACGCTCATTG CTCAGTAAAC CCGACCTGCT TATCTTAGAT GAGCCGATGC AAGGCTTAGA TCCTGAAAGC GAGCGCTGGC TGTATGAGTT TATCGATGAC TTACCGCCTT TTTTGCAGTG TGCCATGGTG GTGGTCTCCC ATGATTTACA CTGGGTGATG CGCGGCAGTC GCCGAGTCAT TTGTCTCAAT AAACACATCT GCTGTGAAGG GCAGCCCAGC GACTTGGGCG TATCTCAAGA ATTCAAAAAG CTTTTCGGTC ATCAATACGA GCAGCCCTAT ATTCATCAGC CGCACGAGTG TCAGCATCAT GCACCGCATG AGCATTGA
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Protein sequence | MDNVGFSISG RGLDRQEGVS EPAKGKLSGW LKGARSAKAK SLALADDPAQ KVLLSNISLS IERGEKISVI GPNGAGKSTL MKLILGLLTP TSGHIKRHPK LEIGYVPQKF SIPAILPLRV QDLLSQTKNR LTAEQQAFLY QRLSVTPLLK KQVIHLSGGE TQRILLARSL LSKPDLLILD EPMQGLDPES ERWLYEFIDD LPPFLQCAMV VVSHDLHWVM RGSRRVICLN KHICCEGQPS DLGVSQEFKK LFGHQYEQPY IHQPHECQHH APHEH
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