| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0176 |
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| Symbol | murD |
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| ID | 5205514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 211558 |
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| End bp | 213015 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640598388 |
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| Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
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| Protein accession | YP_001279085 |
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| Protein GI | 148651992 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.197221 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGCATT ACACCCCTGC GCATACAGAT CAAACTGAGC CACAAAGTGG TGGCCTGATT
CAAAAAGGCG AGGGGCTACA GGTGGTAATC GGTCTGGGTC AATCAGGTTT GGCTACAGCC
AACTATCTGG CCCGCCGCGG CTATAAGGTG GCGGTAACTG ATGGCAATAG CGCCCCTAAG
CTTGCTGAGC AGTTAGAGCC GAATATCAGC ATTCGTGCAT TTGGTGACAT TGATGCAGAA
CTGTTGTTAC AAGCCTCACG TATCATTATT AGCCCAGGGG TATCGCTGGC GACACCGGCT
GTGGCGGCGG CTAAACAGGC TGGCATTGCC ATTGTGAGTG ATATTCAGCT GTTTAAAGAA
GCGTGCAAGG CGCCGATTGT TGCCATTACT GGGTCTAATG CCAAAAGTAC CGTCACCACT
TTGGTGGGTC AAATGGCCAA AGATGCGGGC GTGAATGTGG GTGTTGGTGG CAATATTGGG
GTACCGGCGC TGAGTCTCTT AGAAGATGAG GCGCTTGGTG AGGCCATGCA GCTTGCGGTA
TTAGAGTTGT CGAGCTTTCA GCTAGAGACA GTGACCAATC TTGGCGCAAA AGTGGCCACT
GTGCTTAATA TGTCGCCGGA TCACTTAGAC CGTCATGGCG ATATGCTCGG CTACCATCAA
GCCAAGCACC GTATCTTCCA AGGGGCACAG TCGGTCGTGG TTAACCGTGA TGATGCCTTG
TCTCGCCCTT TAATTGCGGA TAATACGCCG CGTCTAAGTG TCGGATCTGG CGCCCCTGAT
TTGGGCGAAT ATGGTCTAAT TACAGAAGGC GATGGGCGCA TTTATTTGGC CAAAGGCACT
GAGAAGTTAT TGGCAGCAGA TCAGCTCAAA GTTAAAGGCA AGCATAATCT GGTTAATGCG
TTAGCCGCCT TGGCGCTTGG GGGGCTTGCT GGCTTGCCAA AACAGAGCAT GTTAAAAACG
TTACAAGAGT TTTCTGGACT GCCACACCGC TGTCAATTTG TGGATAATGT GGCGGGCGTG
GATTATTTCA ATGATTCTAA AGGCACCAAT GTCGGCTCAA CTTTGGCGGC CATTTTGGGT
TTAGGCTCAG TGTATGGCAA TCAAAGTGGC GCTAAGACCA AGTTGATGCT GATTTTAGGC
GGGCAGGGCA AAGGTCAGCA GTTTGGCGAG CTTGTGCCTT TAATTAATAA ATACGTCAGC
CAAATCCTAC TGATAGGACA AGATGCCGAG CTAATAGAGT CGCATTTGCA GCAGGCCAAT
TTAAGTGGTG ATGTCGAGAC TCATCAGTGC CACGACTTGG CTCAGGCGAT GACGAAAGCA
AACAGCTTAT TATCGAGCAG CCTATCACAA GTAACTACCG TTTTATTATC GCCTGCTTGT
GCCAGCTTAG ATCAGTATCC TAGCTATGCT AAGCGTGGTG AGCACTTTTG TGAGCTGGTA
GGTAAGCTCA AAGATTAG
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| Protein sequence | MSHYTPAHTD QTEPQSGGLI QKGEGLQVVI GLGQSGLATA NYLARRGYKV AVTDGNSAPK
LAEQLEPNIS IRAFGDIDAE LLLQASRIII SPGVSLATPA VAAAKQAGIA IVSDIQLFKE
ACKAPIVAIT GSNAKSTVTT LVGQMAKDAG VNVGVGGNIG VPALSLLEDE ALGEAMQLAV
LELSSFQLET VTNLGAKVAT VLNMSPDHLD RHGDMLGYHQ AKHRIFQGAQ SVVVNRDDAL
SRPLIADNTP RLSVGSGAPD LGEYGLITEG DGRIYLAKGT EKLLAADQLK VKGKHNLVNA
LAALALGGLA GLPKQSMLKT LQEFSGLPHR CQFVDNVAGV DYFNDSKGTN VGSTLAAILG
LGSVYGNQSG AKTKLMLILG GQGKGQQFGE LVPLINKYVS QILLIGQDAE LIESHLQQAN
LSGDVETHQC HDLAQAMTKA NSLLSSSLSQ VTTVLLSPAC ASLDQYPSYA KRGEHFCELV
GKLKD
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