| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0166 |
|---|
| Symbol | |
|---|
| ID | 5205687 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | + |
|---|
| Start bp | 199482 |
|---|
| End bp | 200375 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640598378 |
|---|
| Product | palmitoyl-CoA hydrolase |
|---|
| Protein accession | YP_001279075 |
|---|
| Protein GI | 148651982 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1946] Acyl-CoA thioesterase |
|---|
| TIGRFAM ID | [TIGR00189] acyl-CoA thioesterase II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.00441126 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGATT ATAAACAGCT GGTAGATCAA CTATTAGATA CGGTAAAACT GACCGAGATT
TCGGAAAATA TCTTTGAAGG CAAAAGTTAT GACTACGTAG GGAAGCGTAT CTTTGGCGGT
CAAGTACTGG CACAGGCAAT AATGGCAGCC GCTCAAACTT TAGATGAGGA TAAGCCTTGT
CACTCTTTGC ATGGCTATTT TTTGCGTGGC GGCAGTATCG GTCAGCCAGT TATCTATCAG
GTACGACGCT TACGTGATGG GCGCAGTCTG TCAGCGCGTG AAGTAACCGC GGTACAGATG
AAACAAGACA ATGATGGCAA TATGATTGAG CAAGTGGTGT TCTCTATGAT TGCCTCTTTT
TCTCCGATGG AAGGTGGCTT AGACTATCAA GAAGAAATGC CTGCCTATCC GCCGCCGGAG
GATTTAGAGT CTGAGCAGTC GCTAAAAGAG CATCACGTGG GCAGCGTGCC TGAACCGTTA
CGTGAGCGCT TTATGCGTCC GCGTCATGTG GAAATTAAGC CGGTTAAGCC GCGTGATCCC
GTATATCCTG AGCCTATGGT ACCAAGACAG GCCAATTGGC TACGAATTCG TGAGCTTGGC
GAACAGCCGG TCGCCATCCA GCAAGCACTG TTGGCGTTCT CATCAGACTA TTATCTGGTA
GGCACAGGCC TTATGCCACA TGGCATCAGC TTTATGACCA AAGGTTTGCA GGCTGCCAGT
ATTGATCATT CAATGCATTT TCACCGCCCT TTTGATATTA ATGAGTGGCT GTTGTATGAC
ATGTGGAGTG ACACCACCTC TCATTCTAAA GGCTTAAACC ATGGTCAGTT TTGGCAAAAT
GGCAATCTGG TAGCGACCGT ACAGCAAGAG GGTTTAATGC GCCTTCGCGG ATAG
|
|---|
| Protein sequence | MPDYKQLVDQ LLDTVKLTEI SENIFEGKSY DYVGKRIFGG QVLAQAIMAA AQTLDEDKPC
HSLHGYFLRG GSIGQPVIYQ VRRLRDGRSL SAREVTAVQM KQDNDGNMIE QVVFSMIASF
SPMEGGLDYQ EEMPAYPPPE DLESEQSLKE HHVGSVPEPL RERFMRPRHV EIKPVKPRDP
VYPEPMVPRQ ANWLRIRELG EQPVAIQQAL LAFSSDYYLV GTGLMPHGIS FMTKGLQAAS
IDHSMHFHRP FDINEWLLYD MWSDTTSHSK GLNHGQFWQN GNLVATVQQE GLMRLRG
|
|---|
| |