| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0150 |
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| Symbol | |
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| ID | 5205392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 178666 |
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| End bp | 179898 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640598361 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001279060 |
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| Protein GI | 148651967 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCCCCG TCCCCAATCG AACCACACTC AAAACGCTTG AGTTTGTGTA TCAAGGCATC
AACCCTCAAG GTATGAAGGT AAAAGGCATA CTGACCAGTA GCAGTATGGC GCTGGCCAAA
GCTCAGCTGC GCAAACAAGG CATAGTGACC CAGCGCATTC GGCGTAAGCC TAAAGCGCTT
TGGCGTCGGC AAAAGAAGAT AACCGCACTT GATATCAGTC TGTTTGTGCG GCAATTGGCG
ACGATGACCA AGGCCGGCGT GCCCATAGTA CAGGCCTTTG AGCTTATTGC TCAAGCACTT
GATAAACCCA GTATGAAGCA GCTGGTTTTA CGGGTAAAAC AGCAGCTTGA GACTGGTATG
TCCTTAGAAG ATAGCCTGCG GGCCCATCCA AAACAGTTTG ATGACCTGTT TTGTGCTTTA
GTGTCTGCAG CAGAGCACTC CGGCACGCTA GATACCTTAC TTGAGCGCAT CGCTGATTAC
AAAGAAAACA ACGAGCTGCT TAAGATTAAG CTAAAAAAAG CCATCAAATA TCCGCTAGCC
GTCATGCTGG TGGCGATGAT TGTCAGTATT ATCTTATTGT TAAAAGTGGT GCCGGTGTTC
GCAGACCTAT ATGACTCTAT GGGGTCACAG CTGCCTGCCT TTACCCAATT TGTAGTCACT
TTATCTCATA TCATGCAAAA GCTTTGGCCA ATTTTTTTGC TACTGACGAT AGCGGCTGTA
ATCGCGTTTA GGCAGGCCCA AAAACGCAGC CTAGGCTTTA ATCAGTGGCT CGACAAAGCG
ATATTAAAGC TGCCCATTTT TGGTAGCATA GCCTATCAAG CCATTATTGC CCGCTTTTGC
CGAACCTTAG CCACCACTTA TGCTGCAGGT GTCCCGCTGT TAGAAGCGCT AGGCGCCACT
GCCGCTGCAA CCGACAATCA TGTCTTTGAG ACGGCCACCT ACCAGATGAG ACAACAGGTA
GCTGCTGGTC AACGCCTTGA GCGCTCCATG CGCAGCAGCC AGCTTTTTCC AGCTCTTGCC
GTACAAATGG TGAGTATCGG CGAGGAGTCT GGCAGCTTAG AGCAGATGCT TAATAAGGTG
GCTGATTATT ATGAAGCTCA GGTGACCCAT GCCATTGATG GGTTAACCGA CCTAATGGAG
CCCATTATTA TGGTGATCAT TGGCCTGCTG GTCGGCGGGT TGATAGTGGC AATGTACTTA
CCTATTTTTC AAATGGGCTC AATCCTTGGC TAG
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| Protein sequence | MSPVPNRTTL KTLEFVYQGI NPQGMKVKGI LTSSSMALAK AQLRKQGIVT QRIRRKPKAL
WRRQKKITAL DISLFVRQLA TMTKAGVPIV QAFELIAQAL DKPSMKQLVL RVKQQLETGM
SLEDSLRAHP KQFDDLFCAL VSAAEHSGTL DTLLERIADY KENNELLKIK LKKAIKYPLA
VMLVAMIVSI ILLLKVVPVF ADLYDSMGSQ LPAFTQFVVT LSHIMQKLWP IFLLLTIAAV
IAFRQAQKRS LGFNQWLDKA ILKLPIFGSI AYQAIIARFC RTLATTYAAG VPLLEALGAT
AAATDNHVFE TATYQMRQQV AAGQRLERSM RSSQLFPALA VQMVSIGEES GSLEQMLNKV
ADYYEAQVTH AIDGLTDLME PIIMVIIGLL VGGLIVAMYL PIFQMGSILG
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