Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0125 |
Symbol | |
ID | 5205294 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 147359 |
End bp | 148540 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640598334 |
Product | aminodeoxychorismate lyase |
Protein accession | YP_001279035 |
Protein GI | 148651942 |
COG category | [R] General function prediction only |
COG ID | [COG1559] Predicted periplasmic solute-binding protein |
TIGRFAM ID | [TIGR00247] conserved hypothetical protein, YceG family |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000881139 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGATT CTAATTCAAA AAATCCCAGC AATACCCCGC ACAATCCATC AGATGTTGAC CAAAATGAAG CACCTCACAC TGACGTCTCC TTAGTCTGTG ATGACCCTTC TCGTCATAAA AAGCCGCCGC AAAAACCCAC ATCCAATCGC AGCTATCAGC TGCTGCTGGT ACTGGGATTA ATGGCTGCTT TTGTGGTGGC TATGGCTTAT CAGACCCTGT TTGGTCACTC TGATCGACCC GCCGGCGACT TAGTGGTGGA AGAGGGTCAA AGTTACTATG GCTTCTTACC ACAGTTTCAG CGCGATGTGC CCATGTTCTC AGCCAGCTTG GCCAAGCTTT ATATCAAGTC GGCCGTCGAT ACGCCACTAA AAGCAGGCAC CTATGAAGTG CCTGCCAATG CCAGCTTAAA GCAGCTTATT GATGCTTTTA AACAAGGCGA GAAAGTGGAC ATGGTGGCCA TCCAGATTAT CGAGGGCAAG ACTGCCGCTG ATTTATATAA AGTGATTGCA AACACGCCGG GTGTCACCTT AGAGGTACTA CAAAAAGACG GCAAGCCCAA ACCCAATTTG AAGCAGCTGC TGGGTATCGA TGCTGTCACC CCAGAGGGAG AGTTTGCTGA TAATCTAGAG GGCTGGTTTA CCCCAGACAC CTATCACTAT GCCAAAGGGG TGACCGACAA GCAGATCTTG ACCGATTTGT ACCAGCGTCA ACAAAAAGCG CTGGATGAGG CGTGGGCGAG CCGCTCTAAA GGTCTGCCGT ATAAGTCGCC TTATGAAGCC TTAATTATGG CCTCAATCAT CGAAAAAGAG ACCAGTGTCG ATAGTGAGCG TGAATTGGTG TCTGCGGTGT TTGTAAACCG TTTGAATAAG CCGATGCGCC TACAGACGGA TCCTACCATT ATTTATGGTA TGGGTGAGCG TTATGAGGGC AACATCCGCC GTGCTGATAT CAATGAAAAG ACCGCTTATA ACACCTATCA AATCGACGGC TTACCACCCA CGCCTATTGC GCTACCCTCA CCGGCATCTA TTGACGCTGC GCTACATCCA GCTGACAGTG ATGTGTTGTA CTTTGTGGCG ACGGGTACCG GCGGTCATAA GTTTACCAAG ACTTATGCGG AGCACAACCA AGCGGTAAAA GAGTATTTGG CGGTGATGCG CCAACAAAAA AGCGGTCAAT AA
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Protein sequence | MSDSNSKNPS NTPHNPSDVD QNEAPHTDVS LVCDDPSRHK KPPQKPTSNR SYQLLLVLGL MAAFVVAMAY QTLFGHSDRP AGDLVVEEGQ SYYGFLPQFQ RDVPMFSASL AKLYIKSAVD TPLKAGTYEV PANASLKQLI DAFKQGEKVD MVAIQIIEGK TAADLYKVIA NTPGVTLEVL QKDGKPKPNL KQLLGIDAVT PEGEFADNLE GWFTPDTYHY AKGVTDKQIL TDLYQRQQKA LDEAWASRSK GLPYKSPYEA LIMASIIEKE TSVDSERELV SAVFVNRLNK PMRLQTDPTI IYGMGERYEG NIRRADINEK TAYNTYQIDG LPPTPIALPS PASIDAALHP ADSDVLYFVA TGTGGHKFTK TYAEHNQAVK EYLAVMRQQK SGQ
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