Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0097 |
Symbol | |
ID | 5206222 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 116402 |
End bp | 117076 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640598306 |
Product | Na(+)-translocating NADH-quinone reductase subunit D |
Protein accession | YP_001279007 |
Protein GI | 148651914 |
COG category | [C] Energy production and conversion |
COG ID | [COG1347] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD |
TIGRFAM ID | [TIGR01939] NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTACAG AAACTAAAAA AATCTTAACC ACGCCGATTT TTGATAATAA CCCCATTGCG TTACAAATCT TGGGTATTTG TTCGGCACTG GCAGTAACAA CCAGCGTAAA AAACGCGTTG GTTATGTGTA TTGCTTTGAC CTTGGTAACG GCTTTTTCAA GCTTTTTTAT CTCAACCATC CGTAATCGTA TTCCCTCAAG CATCCGTATT ATTGTACAGA TGACCATTAT TGCCTCACTG GTAATCGTGG TGGATCAGAT TCTAAAAGCA GTGGCTTATG ATGTGAGTAA GTCACTTTCG GTATTCGTTG GTTTGATTAT CACCAACTGT ATCGTTATGG GCCGTGCTGA AGCGTTTGCT ATGAGTAACC CTCCTGTACC AAGCTTTTTA GATGGTATTG GTAACGGTCT TGGCTATTCA GCGGTATTGC TATTTGTGGC CACTATTCGT GAACTCTTAG GTAACGGCAG TATCTTAGGC ATTACCCTAC TACAACCCGT CACCGATGGT GGCTGGTATG TGCCAAATGG CTTATTACTA CTTCCCCCTT CTGCTTTCTT TATTATTGCG ATGTTTATCA CAGTAGTACG TATCTGGAAG CCTGAGCAAG TAGAAGAGCC TGAGTTTGTT ATTAAGCCGC AGTCGAAAGG CATGGCTCAT GGAGGAGGTC ACTAA
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Protein sequence | MATETKKILT TPIFDNNPIA LQILGICSAL AVTTSVKNAL VMCIALTLVT AFSSFFISTI RNRIPSSIRI IVQMTIIASL VIVVDQILKA VAYDVSKSLS VFVGLIITNC IVMGRAEAFA MSNPPVPSFL DGIGNGLGYS AVLLFVATIR ELLGNGSILG ITLLQPVTDG GWYVPNGLLL LPPSAFFIIA MFITVVRIWK PEQVEEPEFV IKPQSKGMAH GGGH
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