Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0069 |
Symbol | |
ID | 5204569 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 84811 |
End bp | 86415 |
Gene Length | 1605 bp |
Protein Length | 534 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640598278 |
Product | cholesterol oxidase |
Protein accession | YP_001278979 |
Protein GI | 148651886 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGAC GTAAATTTAT TCAATCCATG GGGTTAGGTC TGGGCGCTTC GGCTACTTTA AGTGGCTGCC AGACTTTGGC AAAAACTGCT CAGCCACTAT CGGCGCCTCA AGTTCAAGCT GGACATTTTA GTAATATCAT TGTGGGCAGT GGCTATGGTG GCGCGGTATC AGCGCTGCGC CTGAGTGAGC AAGGCCACAA GGTACTTATC CTTGAGATGG GTATGCGCTG GGATAGAAGC CCCAACCATG ATACCTTTTG TAAAATGATT ACCGCTGATG AGCGCTCCAG CTGGTTTAGT CATTGGCCCA ATGCCCCCAT TCCCATCCCC ATTCCTATTA AAAAATATCC TGGGGTGCTC GATTTGATTG AGTATGATGA CATGAAGGTG TTTGCAGGTC GGGCCTATGG CGGCGGCTCG ATTGTCAATG GAGCGATTGC TATTGAGCCT AGACGGTCAC ATTTTGAGCA GACCTTTCCT TGGATTGATG CCAATGAAAT GTATGACACT TTTTTTCCGC GTGCCATGAA GACCTTAAAG GTCAGTAAAA TTCCCGAAGA CTTTTTTAAT AACTCTGAGC ACTATGAATA TACGCGCGCC GCTGAGCGTC AGGCTGATAA AGCGGGGCTA ACTACGGAGT TTTTTGGCAA TAGTTATGAC TTTGACTATA TGCAAAAAGA GGCAAAAGGG GAGGTGTACC CATCGGCTTT AGGCGGTGAG GTGATCTATG GCAATAATGC AGGCAAGTAC TCTTTGGATT TGACCTATCT TAAACAGGCA GAAGCTACCG GTAATGTCAG TGTCAGAACC CTACGTAAAG TTAATAGCAT TCAAGCACTT GATAACCATC AACTCAGACT TGAGGTGCAG GTACTCAATA AAACCGGCGG CATTGATGCC ATAGAATATT ACACCTGCGA TAAATTGTTT TTGAATGCCG GCAGTACCGG CACCTCAGAG CTGCTGCTAA AGAGCCAAGC TCAGGGTAAA TTGACTCAGC TTAATGAGCA CATTGGGCAG CATTGGGGGC CCAATGGTAA TATCATGACC GGCCGCAATT TTGTACATGC TGCAGGTAAG ATTCAGTCCA CCATTCCGGT TAAAGGGATC AACATGTGGG ATGGTGATAG AGGTGGATCA AAGTACAAGA TATTTGCCGA ATTGGCACCG CTGCCGTTGG GTCTTGAGAC TTGGACCACC TTGTACTTGG CAATTACCGA TAACCCAGAG CGTGGTCATT ATTATTATGA TAAAGCCTCG CAAAGCGTAA AACTTAATTG GAAACGCTCA CAAAATGAGT ATTCAGTGAA TGCCGCAAAA GAGCTGATTG AAAAATTGGC TCAGGCGAAT GGCGGGCGGG TATCAAGCTT ACTGTTTAAC CAAGGTTTTG GGGATGACTT CTGCTATCAT CCCTTAGGTG GCTGTGTGCT TGGCAAGGCC ACAGATGAAT TGGGCCGTGT CAAAGGCCAT CGCAATATTT ATGTACAAGA CGGGGCGCTT ATTCCTGGCA GTGCTGGGGT TAACCCTTAT GTCTTTATTA CTGGGCTTGC TGAGCGTAAT ATGGCCTATA TCCTTCAACA AGACTTCTCG TCGTCGACCC CTTAA
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Protein sequence | MKRRKFIQSM GLGLGASATL SGCQTLAKTA QPLSAPQVQA GHFSNIIVGS GYGGAVSALR LSEQGHKVLI LEMGMRWDRS PNHDTFCKMI TADERSSWFS HWPNAPIPIP IPIKKYPGVL DLIEYDDMKV FAGRAYGGGS IVNGAIAIEP RRSHFEQTFP WIDANEMYDT FFPRAMKTLK VSKIPEDFFN NSEHYEYTRA AERQADKAGL TTEFFGNSYD FDYMQKEAKG EVYPSALGGE VIYGNNAGKY SLDLTYLKQA EATGNVSVRT LRKVNSIQAL DNHQLRLEVQ VLNKTGGIDA IEYYTCDKLF LNAGSTGTSE LLLKSQAQGK LTQLNEHIGQ HWGPNGNIMT GRNFVHAAGK IQSTIPVKGI NMWDGDRGGS KYKIFAELAP LPLGLETWTT LYLAITDNPE RGHYYYDKAS QSVKLNWKRS QNEYSVNAAK ELIEKLAQAN GGRVSSLLFN QGFGDDFCYH PLGGCVLGKA TDELGRVKGH RNIYVQDGAL IPGSAGVNPY VFITGLAERN MAYILQQDFS SSTP
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