Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0036 |
Symbol | |
ID | 5205618 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 47808 |
End bp | 48512 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640598244 |
Product | pseudouridine synthase |
Protein accession | YP_001278946 |
Protein GI | 148651853 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000000127048 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTTAG ACAAATTTAT CAGCAAGGCC ACCGAACTGT CGCGTAAAGA AGCGAAAAAA GTGCTGCACG CCAGTGAGAT TACGGTCAAT GATGAAGTAG TAAAAGATGG CAGCGTACAC GTTGATGTGC TTAATGATGA AGTGATGTGG GCCGGTGAGC CGTTATCAGT GGCGACCGGT AGCCGCTATA TTTTATTGCA TAAGCCTGAA GGCTTTGAGT GTACCCTAAA ACCCAAAGAA TATCCGATTG TTACTGAACT TATCGCAGTG CCTGAGCTGA GTAACTTGCG TATCGCAGGC CGTCTCGATG TGGATACCAC CGGTGCCTTA ATCTTAAGTG ATGATGGCAG CTGGCTACAC CGAGTGACCA GCCCGCGTCA TCTGCATGAA AAGGTGTATG AATTAACCTT AGCCGATGCT ATGGATGAAG AAGCGCAAGC GCATGCGATC AAAAAAGTAG GCCAAGGCAT CTTGCTAGAT GGCGATTATG AGCCGACCAA GCCTGCGTTA TTAGAATTCA TTGATGAGAC CCACGCGCGT CTAATTTTGA CCGAAGGTAA ATACCATCAA GTCAAACGTA TGATGGCCTA TTTTGGCAAT AAAGTTGTTG AGCTACACCG TGCCAGCATT GGCGGCATAA CACTTGAAGG ATTAGAGAAA GGCGATAGCC GCTTCTTGAC CGAAGATGAA GTAAATAGCT TCTAA
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Protein sequence | MRLDKFISKA TELSRKEAKK VLHASEITVN DEVVKDGSVH VDVLNDEVMW AGEPLSVATG SRYILLHKPE GFECTLKPKE YPIVTELIAV PELSNLRIAG RLDVDTTGAL ILSDDGSWLH RVTSPRHLHE KVYELTLADA MDEEAQAHAI KKVGQGILLD GDYEPTKPAL LEFIDETHAR LILTEGKYHQ VKRMMAYFGN KVVELHRASI GGITLEGLEK GDSRFLTEDE VNSF
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