Gene PsycPRwf_0036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0036 
Symbol 
ID5205618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp47808 
End bp48512 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content47% 
IMG OID640598244 
Productpseudouridine synthase 
Protein accessionYP_001278946 
Protein GI148651853 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 
TIGRFAM ID[TIGR00093] pseudouridine synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000127048 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTAG ACAAATTTAT CAGCAAGGCC ACCGAACTGT CGCGTAAAGA AGCGAAAAAA 
GTGCTGCACG CCAGTGAGAT TACGGTCAAT GATGAAGTAG TAAAAGATGG CAGCGTACAC
GTTGATGTGC TTAATGATGA AGTGATGTGG GCCGGTGAGC CGTTATCAGT GGCGACCGGT
AGCCGCTATA TTTTATTGCA TAAGCCTGAA GGCTTTGAGT GTACCCTAAA ACCCAAAGAA
TATCCGATTG TTACTGAACT TATCGCAGTG CCTGAGCTGA GTAACTTGCG TATCGCAGGC
CGTCTCGATG TGGATACCAC CGGTGCCTTA ATCTTAAGTG ATGATGGCAG CTGGCTACAC
CGAGTGACCA GCCCGCGTCA TCTGCATGAA AAGGTGTATG AATTAACCTT AGCCGATGCT
ATGGATGAAG AAGCGCAAGC GCATGCGATC AAAAAAGTAG GCCAAGGCAT CTTGCTAGAT
GGCGATTATG AGCCGACCAA GCCTGCGTTA TTAGAATTCA TTGATGAGAC CCACGCGCGT
CTAATTTTGA CCGAAGGTAA ATACCATCAA GTCAAACGTA TGATGGCCTA TTTTGGCAAT
AAAGTTGTTG AGCTACACCG TGCCAGCATT GGCGGCATAA CACTTGAAGG ATTAGAGAAA
GGCGATAGCC GCTTCTTGAC CGAAGATGAA GTAAATAGCT TCTAA
 
Protein sequence
MRLDKFISKA TELSRKEAKK VLHASEITVN DEVVKDGSVH VDVLNDEVMW AGEPLSVATG 
SRYILLHKPE GFECTLKPKE YPIVTELIAV PELSNLRIAG RLDVDTTGAL ILSDDGSWLH
RVTSPRHLHE KVYELTLADA MDEEAQAHAI KKVGQGILLD GDYEPTKPAL LEFIDETHAR
LILTEGKYHQ VKRMMAYFGN KVVELHRASI GGITLEGLEK GDSRFLTEDE VNSF