| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0025 |
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| Symbol | |
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| ID | 5204498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 35934 |
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| End bp | 36977 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640598233 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_001278935 |
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| Protein GI | 148651842 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.408235 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACAGA CTACAAGCAA TCGAATCGAT GTGGTAAATG ATGCCCCTTT ATTACAAGTT
AAGGACGTGG TGACCAGCTT TGATATCAAG CAAAAGGGCA GCTATTTTTG GCAAAAGCCG
GCGACTTTAA AGGCCGTCAA CGGCGTCTCC TTTGAATTAT TCGCCGGTGA AACCTTAGGC
GTGGTGGGTG AGTCGGGCTG CGGTAAGTCG ACGCTGGCTC GCACCATTAT TGGCTTAGTG
ACTGCCCGTT CGGGGAGTAT TAAGTTCAAT GGCGAGGAGA TGATGGGCGC CACCAAAAAG
CAGATGCGTC TTAAGCGAAA AGACATCCAG ATGATTTTCC AAGACCCCTT AGCGTCACTA
AACCCGCGTA TGACGGTGGG TGATATCATT GCCGAGCCAT TACGCACTTA CTATCCCAAA
ATGCCAAAAT CTGAGGTCGA GCAAGAAGTA CGGGCCATGA TGAAAAAGGT CGGTCTACTG
CCCAACCAAG TCAACCGTTA TCCCCATGAA TTCTCAGGCG GTCAGTGCCA ACGCATAGGC
ATTGCACGCG CTCTTATCTT AAGACCTAAG CTGATTATCT GTGATGAGCC GGTATCGGCG
CTGGATGTGT CGATTCAGGC GCAGGTGATC AATCTACTAC AAGACGTCCA AAAAGAGATG
GGCTTGGCGC TTATCTTTAT TGCCCATGAC TTATCTGTGG TCAAGCACAT CTCAGATCGG
GTACTGGTGA TGTATCTGGG TAACGCCGTC GAGCTTGGTG TTGATAAGGC CATATATGAC
AATCCCACCC ATCCTTATAC CCAGGCCTTG ATGTCAGCTG TGCCCATTCC AGATCCACAA
ATTGAGCGGA ACAAAACCAT TCAGCTGTTA GAGGGGGATT TACCCAGCCC TATTAATCCA
CCTTCAGGCT GCGTGTTCCG TACCCGCTGT CCGATAGCAG ATGATGGCTG TGCGCAGACA
AAGCCAGTAT TAGAGGGCAC ACCAGATCAC CAAGTGGCAT GTCTAAAGAA CAAAGTAACT
CAATTACCAG GTGCCGTGGC TTAG
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| Protein sequence | MTQTTSNRID VVNDAPLLQV KDVVTSFDIK QKGSYFWQKP ATLKAVNGVS FELFAGETLG
VVGESGCGKS TLARTIIGLV TARSGSIKFN GEEMMGATKK QMRLKRKDIQ MIFQDPLASL
NPRMTVGDII AEPLRTYYPK MPKSEVEQEV RAMMKKVGLL PNQVNRYPHE FSGGQCQRIG
IARALILRPK LIICDEPVSA LDVSIQAQVI NLLQDVQKEM GLALIFIAHD LSVVKHISDR
VLVMYLGNAV ELGVDKAIYD NPTHPYTQAL MSAVPIPDPQ IERNKTIQLL EGDLPSPINP
PSGCVFRTRC PIADDGCAQT KPVLEGTPDH QVACLKNKVT QLPGAVA
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