| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5305 |
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| Symbol | gidB |
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| ID | 5193720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5952646 |
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| End bp | 5953296 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640589788 |
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| Product | 16S rRNA methyltransferase GidB |
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| Protein accession | YP_001270607 |
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| Protein GI | 148550505 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division |
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| TIGRFAM ID | [TIGR00138] 16S rRNA methyltransferase GidB |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0376618 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGTTCCC TGGTCACCCC TCAACACGCT GAAGAGTTAT CCACAGGTGC GCGCCAGCTT
GGCGTCGAGC TGACTGCCGA GCAGCACGAG AAGCTGCTTG GCTACCTGGC TCTGTTGATC
AAATGGAACA AAGCCTACAA CCTGACTGCT GTGCGCGATC CGGACGAGAT GGTTTCGCGT
CACCTGCTCG ACAGCCTTAG CGTCATGTCT TTTATCCACA ACGATCGTGA TAACTGGCTG
GATGTTGGCA GCGGCGGTGG CATGCCCGGC ATCCCGCTGG CTATCCTGCA TCCACACAAG
CGCGTCACCG TGCTGGACGC CAATGGCAAG AAAACCCGTT TCCTGACTCA GGTGAAAATG
GAACTCAAGC TGGACAACCT CACGGTTATC CACAGCCGGG TCGAGGCCTT CCAGCCGGCA
CAACCGTTCG ACGGAATCAT CTCCCGCGCC TTCAGCAGCA TGGAGAACTT CACCAACTGG
ACCCGCCACT TGGGCGACAC CGGGACGCAA TGGCTTGCAA TGAAGGGGCT GCATCCTGCC
GATGAACTGG TAGCATTGCC CGCAGACTTC ACAGTGGAAA GCGAACAGGC CCTGACCGTT
CCGGGTTGCC AGGGCCAGCG CCATCTGCTG ATACTGCGCC GCAAGGCATG A
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| Protein sequence | MSSLVTPQHA EELSTGARQL GVELTAEQHE KLLGYLALLI KWNKAYNLTA VRDPDEMVSR
HLLDSLSVMS FIHNDRDNWL DVGSGGGMPG IPLAILHPHK RVTVLDANGK KTRFLTQVKM
ELKLDNLTVI HSRVEAFQPA QPFDGIISRA FSSMENFTNW TRHLGDTGTQ WLAMKGLHPA
DELVALPADF TVESEQALTV PGCQGQRHLL ILRRKA
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