Gene Pput_5299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_5299 
Symbol 
ID5190622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5948582 
End bp5949052 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content55% 
IMG OID640589782 
ProductF0F1 ATP synthase subunit B 
Protein accessionYP_001270601 
Protein GI148550499 
COG category[C] Energy production and conversion 
COG ID[COG0711] F0F1-type ATP synthase, subunit b 
TIGRFAM ID[TIGR01144] ATP synthase, F0 subunit b 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.329705 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.143004 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACATTA ATGCAACCCT GATTGGCCAA TCCGTTGCTT TCCTGATTTT TGTACTCTTC 
TGCATGAAGT ATGTATGGCC TCCGGTCATC ACTGCTCTGC AAGAGCGCCA AAAGAAGATT
GCCGACGGCT TGGACGCTGC CAACCGCGCA GCTCGCGACC TGGAGCTGGC CCAAGAGAAA
GCGGGTCAGC AACTGCGTGA AGCTAAAGCA CAAGCAGCCG AAATCATCGA GCAAAGCAAG
AAACGCGCTG CTCAGCTTGT CGAGGAAGCC CGTGAACAGG CCCGCGTCGA AGCTGACCGT
GTGAAGGCTC AGGCTCTGGC CGAGATCGAA CAGGAACTGA ACAGCGCTAA AGACGCCCTG
CGTGCCCAAG TGGGTGCTCT GGCCGTTGGT GGTGCTGAAA AGATCCTTGG CGCCACAATC
GATCAAAACG CGCATGCGGA GCTGGTTAAC AAACTGGCCG CTGAAATTTA A
 
Protein sequence
MNINATLIGQ SVAFLIFVLF CMKYVWPPVI TALQERQKKI ADGLDAANRA ARDLELAQEK 
AGQQLREAKA QAAEIIEQSK KRAAQLVEEA REQARVEADR VKAQALAEIE QELNSAKDAL
RAQVGALAVG GAEKILGATI DQNAHAELVN KLAAEI