Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_5298 |
Symbol | |
ID | 5190621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 5948033 |
End bp | 5948569 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640589781 |
Product | F0F1 ATP synthase subunit delta |
Protein accession | YP_001270600 |
Protein GI | 148550498 |
COG category | [C] Energy production and conversion |
COG ID | [COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) |
TIGRFAM ID | [TIGR01145] ATP synthase, F1 delta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.243387 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.15096 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGAAC TGACCACGTT GGCCCGACCT TACGCTAAGG CTGCCTTTGA GCATGCCCAG GCCCATCAGC AACTGGCCAA TTGGTCAGCC ATGCTCGGCC TGGCTGCTGC GGTGTCGCAA GACGACACCA TGCAGCGCCT GCTCAAGGCC CCGCGACTGA CGAGCGCAGA AAAGGCCGCC ACGTTCATTG ACGTGTGCGG TGACAAGTTC AATGCACAGG CACAGAATTT CATTCATGTT GCCGCGGAAA ACGACCGTCT CCTGCTTCTG CCGGAGATTG CCGCCCTGTT CGACCTGTAC AAGGCCGAGC AAGAGAAATC CGTGGACGTG GAAGTCACCA GTGCCTTCGC GTTGAACCAA GAACAGCAAG ACAAACTCGC CAAGGTTCTC AGTGCACGGT TAGGCCAGGA AGTGCGCCTG CACGCGTCGG AGGATGCCAG CCTGATTGGC GGCGTCGTCA TCCGCGCCGG TGACCTGGTA ATCGATGGCT CTGTTCGCGG CAAAATCGCG AAACTGGCCG AAGCATTGAA ATCTTGA
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Protein sequence | MAELTTLARP YAKAAFEHAQ AHQQLANWSA MLGLAAAVSQ DDTMQRLLKA PRLTSAEKAA TFIDVCGDKF NAQAQNFIHV AAENDRLLLL PEIAALFDLY KAEQEKSVDV EVTSAFALNQ EQQDKLAKVL SARLGQEVRL HASEDASLIG GVVIRAGDLV IDGSVRGKIA KLAEALKS
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