| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5292 |
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| Symbol | |
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| ID | 5193803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5941238 |
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| End bp | 5942014 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640589775 |
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| Product | DeoR family transcriptional regulator |
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| Protein accession | YP_001270594 |
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| Protein GI | 148550492 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.358766 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAAAC GAAATACACC ACAACGGCGA CACAATATTC TGGCTCTGCT CAGCGAGCAG
GGTGAGGTAA GTGTGGACGC GTTGGCCAAG CGTTTCGCCA CCTCGGAAGT GACTATTCGC
AAAGACCTTG CCGCCTTGGA AACCAACGGC TTGTTGTTAC GCCGCTACGG TGGTGCGGTG
CCGGTGCCGC AAGAGTTGCT CGGTGAACCG GCACAACCCG TCTCTTCGTA TAAAAAGGCC
ATTGCGCGTG CCGCTGTGGG GCGTATCCGC GAACATGCGC GCATTATCAT CGACAGCGGC
AGCACCACGG CGGCAATGAT CCCCGAGCTG GGGCGCCAGC CAGGCCTGGT GGTGATGACC
AATTCGCTCA ATGTGGCTCG TGCAATCTGC GACCTCGAAC ACGAGCCGGT GCTGCTGATG
ACCGGTGGCA CCTGGGACCC ACATTCCGAA TCGTTCCAGG GCCAGGTCGC GGAGCAGGTA
CTGCGCTCCT ACGATTTCGA CCAATTATTC ATCGGTGCCG ATGGCATCGA CCTCGGCCGG
GGTACCACTA CCTTCAACGA ACTGCTTGGG CTGAGCCGGG TCATGGCCGA AGTTGCCCGT
GAAGTGATCG TGATGGTCGA GTCGGACAAG GTGGGGCGCA AGATCCCTAA CCTCGAGCTG
CCCTGGGGCA GCGTACACAC CCTTATTACA GATGAACGCC TGCCAGCAGC AGCGCGCGAA
CAAATTCAAG CCCGCGGCAT CAACCTGATC TGCGCCGCGA TCAGCCAGGA GCAATAA
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| Protein sequence | MSKRNTPQRR HNILALLSEQ GEVSVDALAK RFATSEVTIR KDLAALETNG LLLRRYGGAV
PVPQELLGEP AQPVSSYKKA IARAAVGRIR EHARIIIDSG STTAAMIPEL GRQPGLVVMT
NSLNVARAIC DLEHEPVLLM TGGTWDPHSE SFQGQVAEQV LRSYDFDQLF IGADGIDLGR
GTTTFNELLG LSRVMAEVAR EVIVMVESDK VGRKIPNLEL PWGSVHTLIT DERLPAAARE
QIQARGINLI CAAISQEQ
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