| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5290 |
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| Symbol | |
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| ID | 5194894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5938412 |
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| End bp | 5939053 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640589773 |
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| Product | 3-oxoacid CoA-transferase, B subunit |
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| Protein accession | YP_001270592 |
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| Protein GI | 148550490 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
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| TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.359976 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCATCA CCAAAAAGCT CTCCCGCACC GAAATGGCCC AGCGCGTGGC CGCAGACATT
CAGGAAGGCG CCTACGTCAA CCTGGGCATC GGCGCACCGA CCTTGGTGGC CAATTTCCTG
GGTGACAAAG AAGTGTTCCT GCACAGCGAA AACGGCCTGC TGGGCATGGG CCCGAGCCCG
GCGCCGGAGG AGGAAGACGA TGACCTGATC AACGCCAGTA AGGAGCACGT GACCATGCTC
CCCGGTGGCG CTTTCTTCCA CCACGCCGAC TCGTTCTCGA TGATGCGCGG CGGCCATCTG
GACATCGCTG TATTAGGCGC CTTCCAGGTG TCGGTCAAGG GCGACCTGGC CAACTGGCAC
ACCGGCGCCG AGGGTTCCAT TCCGGCCGTG GGCGGCGCGA TGGACCTAGC CACTGGTGCC
CGCCAGGTGT TCGTGATGAT GAACCACCTG ACCAAGTCAG GTGAAAGCAA GCTGGTGCCC
GAGTGCACTT ACCCGCCGAC CGGCTTCGGT TGCGTCAGCC GCATCTACAC CGACATGGCC
GTGCTGGAGG TGACCTCAGA TGGGCTGCGC GTGGTCGAGA TCTGTGCGGA AATTGACTTC
GAGCAGTTGC AAGCGCTGAG TGGCGTGCCG CTGATCCAGT AA
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| Protein sequence | MSITKKLSRT EMAQRVAADI QEGAYVNLGI GAPTLVANFL GDKEVFLHSE NGLLGMGPSP
APEEEDDDLI NASKEHVTML PGGAFFHHAD SFSMMRGGHL DIAVLGAFQV SVKGDLANWH
TGAEGSIPAV GGAMDLATGA RQVFVMMNHL TKSGESKLVP ECTYPPTGFG CVSRIYTDMA
VLEVTSDGLR VVEICAEIDF EQLQALSGVP LIQ
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