| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5281 |
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| Symbol | |
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| ID | 5193926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5928954 |
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| End bp | 5930195 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640589764 |
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| Product | outer membrane porin |
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| Protein accession | YP_001270583 |
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| Protein GI | 148550481 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.746207 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAACATTC ATGCAAATCG CAAAAGCCTC GTACTCGTCA TTCCTACTCT GCTTCTGCCT
ATCAATGTTT GGGCTGAAGG GTTCGTGGAA GACACTAGCG CCACTCTGAC CCTCAGAAAC
TTCTTTTTTG AACGCAATTT CACTGCGCCT GGTGTCACTC AGAGCCATGC CCGTGAGTGG
ACGCAGGGTT TTATCTTTGA TCTCAAGTCA GGATTTACAC AGGGCACCGT GGGCTTTGGC
GTGGATGTCT TGGGTAAGTA TGCAGTGAAG CTCGACGGAG GCGCAGGGGA GTATGGTGCG
CTGCTGTTGC CCAAGGATGG CGATGGTGAT CCAGCCGGAA GCTTCGGCAG GCTTGGGGTT
GCATTAAAGG CAAAGCTGTC GAACACCGAG GTCAAGGTCG GCGAGTGGAT GCCTAATTTC
CCGATCGTCA CCGCAGACGA CTTCAGGGCT CTGCCGCAGA CTTTCCGCGG CGCTCAGATC
GCTTCGCAAG AGCTCAAGAA CTGGTCGTTT TACGCAGGCG AGTTCACCAA GACCAGCCTT
CGGAATGACT CCTCCATGGA GGACCTCTCA TTCGGATCTG CGCAGTCAGA TTCCTTCACA
TTCTTGGGTG CTGACTACCG CTCTAGCTCC AAAAATACGA CTGTCCGTCT CTGGTCGGGG
GAGTTGGAAG ACATCTACAA GCAGCACTAC CTTGGGCTCA TTCAGAAATG GCAGCTCAGC
CAAACGGTAT CGCTTACCTC AAACCTTGGC TATTTCTGGG GCAAGGATAC GGGGGTTGCA
AAGGCAGGCT CGTTGGATAA CCAGACAGCT TCCGCTCTGT TCAGCCTCAA CATCGCTCAG
CACTCGATCA GTATCGGGCT GCAAAATGTT TCGGGTGACT CCGGGTGGAT GCGAATCGGC
GGGACCGGCG GCATTTACCT TGCGAACAAC ACCTTCAACC ATGCCTTCGA CAATCCTCGC
GAAAGATCCT GGCAAGTTCG CTATGACCTC AATTTCGTTG GCTACGGGAT ACCTGGTCTG
ACTCTCATGA CGCGGTATGT GCATGGCGAT AACGTGGAAT TGAGAAACGT CAAAGACGGT
TCGGAATGGG TACGAGAATC AGAGCTGGGT TACGTGTTTC AGAGCGGCAA GCTGAGGGAT
CTAGCCGTGC GGTGGCGAAA CTCCAGCGTC AGACGAGATT TCAACGCCAG TGATTACGAT
GAGAACCGCC TAATCGTCAG TTACCCGCTC AACATTTTCT AG
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| Protein sequence | MNIHANRKSL VLVIPTLLLP INVWAEGFVE DTSATLTLRN FFFERNFTAP GVTQSHAREW
TQGFIFDLKS GFTQGTVGFG VDVLGKYAVK LDGGAGEYGA LLLPKDGDGD PAGSFGRLGV
ALKAKLSNTE VKVGEWMPNF PIVTADDFRA LPQTFRGAQI ASQELKNWSF YAGEFTKTSL
RNDSSMEDLS FGSAQSDSFT FLGADYRSSS KNTTVRLWSG ELEDIYKQHY LGLIQKWQLS
QTVSLTSNLG YFWGKDTGVA KAGSLDNQTA SALFSLNIAQ HSISIGLQNV SGDSGWMRIG
GTGGIYLANN TFNHAFDNPR ERSWQVRYDL NFVGYGIPGL TLMTRYVHGD NVELRNVKDG
SEWVRESELG YVFQSGKLRD LAVRWRNSSV RRDFNASDYD ENRLIVSYPL NIF
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