Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_5265 |
Symbol | |
ID | 5193769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 5912400 |
End bp | 5913272 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640589748 |
Product | pyridoxamine kinase |
Protein accession | YP_001270567 |
Protein GI | 148550465 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2240] Pyridoxal/pyridoxine/pyridoxamine kinase |
TIGRFAM ID | [TIGR00687] pyridoxal kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.498861 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGTA CCCCGCACCT GCTCGCCATT CAGTCCCACG TGGTGTTCGG CCACGCCGGC AACAGCGCCG CGGTATTCCC CATGCAGCGT ATCGGGGTCA ATGCCTGGCC ACTCAATACC GTGCAGTTCT CCAATCACAC ACAGTATGGC CAGTGGGCGG GTGAAGTGCT TGCCCCAGCG CAAATTCCTG CGTTGGTGGA AGGCATTTCC AATATCGGCG AGCTGGGCCA CTGCGATGCA GTGCTTTCCG GCTACCTGGG CAGTGCCGAA CAAGGGCGAG CGATCCTGGC CGGCGTCGAG CGGATCAAGG CGGTAAACCC AAAAGCGTTA TACCTGTGCG ACCCGGTCAT GGGGCACCCG GAAAAGGGCT GCATCGTGCC GCCCGAAGTC AGTGAGTTTC TGCTTGACGA GGCTGCAGCC ACAGCGGACA TCCTGTGCCC CAACCAGTTG GAGCTGGACA GCTTCTGTGG GCGCCGCGCC CAGTCGCTGG AGGATTGCGT GAACATGGCG CGCAGCCTGC TGCAGCGTGG GCCGCAGGTT GTACTGGTCA AGCACCTGGC GTACCCCGGG CGGGCCGAAG AACAGTTCGA AATGTTGCTG GTGACCGCCG AGCACAGCTG GCACTTGCGC CGCCCACTGC TGGCGTTTCC GCGTCAGCCG GTGGGGGTGG GTGACCTGAC CTCAGGCTTG TTCCTGGCGC GTGTGCTGCT CGGCGACAGC TGGGTGCAGG CATTCGAATT CACGGCTGCG GCAGTGCATG AAGTGCTGCT GGAAACCCAG GCCTGCGCCA GCTACGAATT GCAGTTGGTA CGGGCCCAGG ACCGCATTGC GCACCCACGG GTGCGCTTCG AAGCGCAGTT ACTGGCGCTT TAA
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Protein sequence | MKRTPHLLAI QSHVVFGHAG NSAAVFPMQR IGVNAWPLNT VQFSNHTQYG QWAGEVLAPA QIPALVEGIS NIGELGHCDA VLSGYLGSAE QGRAILAGVE RIKAVNPKAL YLCDPVMGHP EKGCIVPPEV SEFLLDEAAA TADILCPNQL ELDSFCGRRA QSLEDCVNMA RSLLQRGPQV VLVKHLAYPG RAEEQFEMLL VTAEHSWHLR RPLLAFPRQP VGVGDLTSGL FLARVLLGDS WVQAFEFTAA AVHEVLLETQ ACASYELQLV RAQDRIAHPR VRFEAQLLAL
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