| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5226 |
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| Symbol | ubiA |
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| ID | 5195181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5867806 |
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| End bp | 5868696 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640589709 |
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| Product | 4-hydroxybenzoate octaprenyltransferase |
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| Protein accession | YP_001270528 |
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| Protein GI | 148550426 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
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| TIGRFAM ID | [TIGR01474] 4-hydroxybenzoate polyprenyl transferase, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.46324 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTACCTGC AACTGCTCAA GTCGCTCAAC CGCCTGCATC CACGGGCCTG GGACTTCGTC
CAGCTCAGCC GCATGGACCG GCCGATAGGC ATCTACCTGC TGTTGTGGCC GACCCTGTCG
GCAGTGTGGA TTGCCGGCAA TGGGTCACCC ACCCTGGCCA ATGTGCTCAT CTTCGGCCTT
GGTGTGGTGC TGATGCGCGC CGCCGGCTGC TGCATCAACG ACTTTGCCGA CCGCAAGGTT
GACGGCCATG TCAAGCGGAC CGCCGACCGC CCCCTGGCCA GTGGCCGGGT GCGGCCACGC
GAGGCGCTGA CACTGTTCGC GATTCTGGTC GGGGTGAGTT TCCTGCTGGT GCTGTGCACC
AACAGCCGCA CCGTCTGGCT GTCGTTCGGG GCGGTGGCCT TGGCGTTCTG CTACCCGTTC
ATGAAGCGCT ACACCTACTA CCCGCAGGTG GTGCTGGGGG CGGCGTATTC GTGGGGCATT
CCCATGGCTT TCACAGCCGC TGGCGGTGAA TTGCCGGCCG GCGCCTGGCT GCTGTATATC
GCCAACCTGC TGTGGACGGT AGGCTACGAC ACCTACTACG CCATGGTCGA CCGCGATGAC
GACCTGAAGA TTGGCGTGAA GTCCACAGCG ATCCTGTTCG GCGACGCTGA TCGCAGCATC
ATCCTGACCC TGCAGCTGCT GTCGCTGGGC TGCCTGTTGC TGGCCGGTAG CCGCTTCGAC
CTGGGTGGCT GGTTCCACCT TGGGTTGCTG GGTGCGGCGG CGTGCTTTGC CTGGGAATAC
TGGTCAACGC GCAAGCTGGA CCGGGAATCG TGCTTCAAGG CATTTCTGCA CAACCACTGG
GCGGGGATGC TGGTGTTTAT CGGAGTTGTA CTGGATTACG CGTTGCGCTG A
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| Protein sequence | MYLQLLKSLN RLHPRAWDFV QLSRMDRPIG IYLLLWPTLS AVWIAGNGSP TLANVLIFGL
GVVLMRAAGC CINDFADRKV DGHVKRTADR PLASGRVRPR EALTLFAILV GVSFLLVLCT
NSRTVWLSFG AVALAFCYPF MKRYTYYPQV VLGAAYSWGI PMAFTAAGGE LPAGAWLLYI
ANLLWTVGYD TYYAMVDRDD DLKIGVKSTA ILFGDADRSI ILTLQLLSLG CLLLAGSRFD
LGGWFHLGLL GAAACFAWEY WSTRKLDRES CFKAFLHNHW AGMLVFIGVV LDYALR
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