| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5217 |
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| Symbol | |
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| ID | 5193668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5859235 |
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| End bp | 5859966 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640589700 |
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| Product | TonB family protein |
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| Protein accession | YP_001270519 |
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| Protein GI | 148550417 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.315671 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAAA CGCGCTCTAA CATGGCGCGC TACGGTGGCA GCCTGGCGAT CGTGCTGGGT
GTGCACGTGG TCGCCGTGCT GCTGACGCTC AACTGGTCGG TACCACAGGC CATCGAACTG
CCCCCGGCAG CGATGATGGT CGAACTGGCA CCGTTGCCGG AGCCTGCGCC ACCACCACCC
CCAAAGGCAG CTCCGCAGCC ACCGGCCCCG GTCGAGGAAC CACCGTTGCC GAAGCTGGCA
GAAGCGCCCA AGCCCAAGAT CGCCATCCCC AAGCCGCCCA AGCCGAAGGC CAAGCCCCAG
CCGCCCAAGC CCGAGAAAAA GCCTGAGCCG CCGAAGGAAG CACCGCCCAC CGAGCAAACG
GTGGACGCAC CACCCAGCAA CTCGCCACCG CAGAAGTCTG CGGCACCGGC ACCGAGCATT
GCGTCCAACA GCAACGCCTT GCCAACCTGG CAGAGCGACC TGCTGCGCCA CCTTGCCAAG
TACAAGCGTT ACCCGGAAGA CGCGCGCCGT CGCGGCCTGC AAGGCATGAA CCGCCTGCGC
TTCGTGGTCG ACGCCGAAGG CAAGGTCGTG TCGTACTCCA TGGCCGGTGG CTCGGGCAGT
GCCGCACTGG ACCGGGCGAC CCTGGAAATG ATCCGTCGGG CCGGCACGGT ACCCAAGCCG
CCACCCGAGT TGCTGAACAA TGGCACGATT GAAGTCGTGG CACCGTTCGT CTACTCACTG
GACCGCCGCT AA
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| Protein sequence | MMKTRSNMAR YGGSLAIVLG VHVVAVLLTL NWSVPQAIEL PPAAMMVELA PLPEPAPPPP
PKAAPQPPAP VEEPPLPKLA EAPKPKIAIP KPPKPKAKPQ PPKPEKKPEP PKEAPPTEQT
VDAPPSNSPP QKSAAPAPSI ASNSNALPTW QSDLLRHLAK YKRYPEDARR RGLQGMNRLR
FVVDAEGKVV SYSMAGGSGS AALDRATLEM IRRAGTVPKP PPELLNNGTI EVVAPFVYSL
DRR
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