| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5206 |
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| Symbol | |
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| ID | 5193494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5847858 |
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| End bp | 5849465 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640589689 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001270508 |
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| Protein GI | 148550406 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.959368 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.243186 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAAA GCGAGCCTTG TACCCAAGGC TTGTTAAAAC AATTCCAAAA TTTACGGCAA
ATACTCATGA GCAATTACAC AGAAGCCGGC CGCCCACCCG ATGTGGCGGC CGACGCGGGC
AACACTCAGC GCAGCAAAGG CCTGGCCAAG GGCCGCTTGG GCCTGCTGGC CAGCGTGGTG
CTGGGCATTT CCACCATCGC CCCGGTCTAT ACCCTGACCG GGGCCCTTGG CCCGACCGTG
CGTGAGGTGG GCGCCCACCT GCCGGCCGTG TTCATCGTGG GCTTCCTGCC GATGCTGCTG
GTTGCCCTGG GCTATCGCGA GCTGAACTCG GCGGAGCCGG ACAGCGGGAC TTCGTTTACC
TGGTCGGCGC GTGCATTCGG CCCGATGATC GGCTGGATCG GCGGCTGGGG ACTGGTGGTT
GCCACCACGA TCGTGCTGTC GAACCTGGCA GGTGTGGCGG TGGACTTCTT CTACCTGTTC
CTTGGCCAGA TCACCGGCAA GCATGAGCTG GCAGCGTTGG CCGACAACCT GTTGATCAAC
ATCGTTACCT GTTGCGTGTT CATTGGTTTG GCAGTATGGA TCTGCTGTCG GGGTATCGCC
ACCACAATGA CTGTGCAGTA CGGCTTGGTG GCCCTGCAGT TGCTGGTGTT GATCGGCTTT
GCTTTCGCCG CTTTCGGCGG CACCACCGCG CCGCCACCGC TGGCGTTCGA TTTCGCCTGG
TTCAACCCGT TCGGTGTCGA GTCGTTCTCG GCCTTTGCCG CTGGCCTGTC ACTGTCGATC
TTCATCTTCT GGGGCTGGGA CACTTGCTTG ACCGTCAGTG AAGAATCGGT GGGTAGCGAA
GAGGTGCCGG GCAAGGCCGC TACCTGGACC GTGATGTTGA TTCTCGGCCT GTACCTGTTC
ACCGCCATCG CGACCCTGCA GTTTGCCGGT ATCAGTGAAA CGGGTCTGGG CCTGAACAAC
CCGCGCATCC AGGAGAACGT CTTTGCCCAC CTAGCCGGCC CGGTCATGGG GCCGCTGGCG
ATCCTGATGT CCATCGCTGT GCTGGCCAGT ACGGCGGCGT CGCTGCAGTC CACCTTCGTG
GCGCCGGCGC GCACCCTGTT GGCCATGGGT TATTACGGCG CGGTGCCGCA GAAGTTCGCC
AGCGTCTGCC CGCGCTCGCA AACGCCGCGC TATGCCACCA TCTGCGCCGG CCTGGCCGCA
GGCCTGTTCT ACGTGACCAT GCGTACGCTG AGCGAGAACG TGCTGGCAGA TACCATCACG
GCATTGGGCA TGATGATCTG CTTCTACTAT TCGCTGACCG CGTTTGCCTG CGTCTGGTAT
TTCCGCGGCA GCCTGTTCGA CAGCCTGCGC CACTTCATCA TGCGCGGCCT GTGCCCGCTG
GTGGGTGGGG TGATCTTGTC GGTGATCTTC GTGCGTACCG CCATCGACAG TGCGTCGCCG
GACTTTGGCA GCGGCTCGCA TGTGGGCGGT CTGGGGCTGG TGTTCGTGAT TGCCGCGATC
ATCTCGGTGC TTGGTATCGG CCTGATGATG CTGTCGCGCA TGCGTGCGCC GGCGTACTTC
CTCGGGGCTA CCCTGCGTCA GCAGGCTACC TTGCCACTGC AGGAATAA
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| Protein sequence | MSESEPCTQG LLKQFQNLRQ ILMSNYTEAG RPPDVAADAG NTQRSKGLAK GRLGLLASVV
LGISTIAPVY TLTGALGPTV REVGAHLPAV FIVGFLPMLL VALGYRELNS AEPDSGTSFT
WSARAFGPMI GWIGGWGLVV ATTIVLSNLA GVAVDFFYLF LGQITGKHEL AALADNLLIN
IVTCCVFIGL AVWICCRGIA TTMTVQYGLV ALQLLVLIGF AFAAFGGTTA PPPLAFDFAW
FNPFGVESFS AFAAGLSLSI FIFWGWDTCL TVSEESVGSE EVPGKAATWT VMLILGLYLF
TAIATLQFAG ISETGLGLNN PRIQENVFAH LAGPVMGPLA ILMSIAVLAS TAASLQSTFV
APARTLLAMG YYGAVPQKFA SVCPRSQTPR YATICAGLAA GLFYVTMRTL SENVLADTIT
ALGMMICFYY SLTAFACVWY FRGSLFDSLR HFIMRGLCPL VGGVILSVIF VRTAIDSASP
DFGSGSHVGG LGLVFVIAAI ISVLGIGLMM LSRMRAPAYF LGATLRQQAT LPLQE
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