Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_5196 |
Symbol | dut |
ID | 5195168 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 5839891 |
End bp | 5840346 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640589679 |
Product | deoxyuridine 5'-triphosphate nucleotidohydrolase |
Protein accession | YP_001270498 |
Protein GI | 148550396 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0756] dUTPase |
TIGRFAM ID | [TIGR00576] deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.867094 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.40501 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGCTC TTCAAGCCAA GATCCTCGAC CCACGCCTGG GCAGCGAATT CCCGCTACCC GCGTACGCTA CCCCCGGCTC CGCCGGCCTC GACCTGCGCG CCCTGCTCAA GGAAGACACC CTCCTCGAAC CGGGCCAGAC CATCCTGATT CCTACCGGCC TGTCGATCTA CATCGGCGAC CCGGGTCTGG CAGCAGTCAT CCTGCCGCGC TCGGGTCTGG GCCATAAGCA CGGCATCGTG CTGGGCAACC TGGTCGGCCT GATCGATTCG GACTACCAGG GCGAGCTGAT GGTGTCGTGC TGGAACCGCG GCAACACGCC GTTCACCATC GCGGTTGGCG AGCGCATCGC CCAGCTGGTG CTGGTACCGG TGGTGCAGGC TCACTTCGAC ATCGTCGAAG CATTCGACGA AAGCCAGCGT GGCGCTGGCG GCTTCGGCCA CTCCGGCAGC CACTGA
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Protein sequence | MHALQAKILD PRLGSEFPLP AYATPGSAGL DLRALLKEDT LLEPGQTILI PTGLSIYIGD PGLAAVILPR SGLGHKHGIV LGNLVGLIDS DYQGELMVSC WNRGNTPFTI AVGERIAQLV LVPVVQAHFD IVEAFDESQR GAGGFGHSGS H
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