| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5193 |
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| Symbol | |
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| ID | 5195568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5836143 |
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| End bp | 5837732 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640589676 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001270495 |
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| Protein GI | 148550393 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0587295 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.27415 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGCCG CCGCACTTTC CTTATTGTTC ACCTCCCTGT TCGCCGCCGG CGTTGCCCAG
GCCGCTCCGC TGAGCGTTTG CAGCGAGGCC AGCCCCGAAG GTTTCGACGT GGTGCAGTAC
AATTCGCTCA CCACCACCAA CGCCACCGCC GACGTGCTGA TGAACCGCCT GGTGGAGTTC
GATGCGGCGC AAGGCAAGGT GGTGCCGAGC CTGGCGACCA GCTGGACGGT ATCGGCCGAC
GGCCTGGTGT ATGACTTCAC CCTGCGCGAT GACGTCAAGT TTCACAGCAC CCCCTACTTC
AAGCCAAGCC GCAAGCTGAA TGCCGACGAC GTGCTGTTCA GCTTCCAGCG CATGCTCTAC
CCGGCCCATG CCTGGCACAA GACTGCGCCG GGCGGCTACC CGCATGCCCA ATCGCTGCAG
CTGGGCAGCC TGATCAAGGC GATCGAGGCA CCGTCGCCGA ACACCGTGCG CTTCACCCTC
AGCCACCCGG ACGCCACCTT CCTGGCCACC CTGAGCATGG GCTTCGCCTC GATCTACTCC
GCCGAATACG CCGACAAGCT GCTCAAGGCC GGCACACCGG AAAAGCTCAA CAACCAACCG
ATCGGCACCG GGCCGTTCGT GTTCCAGCGT TTCCAGAAAG ACGCCGTGGT GCGCTACCGC
GCCAACCCGG ACTACTTCGC CGGCAAGCCG GCGGTCGACC CGCTGATCTT CGCCATCACC
ACCGATGCCA ACGTGCGCCT GCAGAAGCTC AAGCGTGGCG AGTGCCAGGT TGCCCTGTCG
CCCAAGCCGT TGGACATTGC CGAAGCGGGC AAGGACGGTA ACCTCAAGGT GGCCACCACC
CCGGCATTCA TGACTGCCTT CGTCGCCATC AACAGCCAGC ACCCGCCGCT GGACAAGCCG
GAAGTGCGCC AGGCGATCAA CCTGGCCTTC GACAGGCAGG CCTACCTCAA GGCCGTGTTC
GAAGACTCTG CGGTGGCTGC CAACGGCCCC TACCCGCCTA ATACCTGGAG CTACGCCAAG
GACCTGCCCG GCTACCCGCT GGACCTGAAG AAAGCCAAGG CCCTGCTGAC CAAGGCCGGG
CTGGCCGAAG GCTTCAGTAC CACCATCTGG ACCCGTCCCT CGGGAAGCCT GCTCAACCCC
AACCCCAGCC TTGGCGCGCA GATGCTGCAA GCCGACCTGG CGAAGATTGG CGTGAAAGCG
GAGATCCGCG TGATCGAGTG GGGCGAACTG ATACGCCGTG CCAAGGCCGG CGAGCATGAC
TTGCTGTTCA TGGGCTGGGC GGGCGACAAC GGCGACCCGG ACAACTTCCT CAGCCCGCAG
TTTTCCTGTG CGGCGGTAGA GTCAGGGACC AACTTCGCAC GCTTCTGCGA CAGCCGCCTC
GACCAGCTGA TCAGCGCCGG GCGCACCACC AACGACCAAA GCGTGCGCAG CCGGCTGTAC
CAGCAGGCGC AGACACTGAT CCAGCAGCAG GCGCTGTGGG TGCCACTGGC GCACCCGACG
GCGGCGACCT TGCTGCGCCA AGGCGTCGAG GGGTACCAGG TGAGCCCGTT CGGGCGGCTG
GATTTCAGCA AGGTGACGGT GACCAAGTAA
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| Protein sequence | MRAAALSLLF TSLFAAGVAQ AAPLSVCSEA SPEGFDVVQY NSLTTTNATA DVLMNRLVEF
DAAQGKVVPS LATSWTVSAD GLVYDFTLRD DVKFHSTPYF KPSRKLNADD VLFSFQRMLY
PAHAWHKTAP GGYPHAQSLQ LGSLIKAIEA PSPNTVRFTL SHPDATFLAT LSMGFASIYS
AEYADKLLKA GTPEKLNNQP IGTGPFVFQR FQKDAVVRYR ANPDYFAGKP AVDPLIFAIT
TDANVRLQKL KRGECQVALS PKPLDIAEAG KDGNLKVATT PAFMTAFVAI NSQHPPLDKP
EVRQAINLAF DRQAYLKAVF EDSAVAANGP YPPNTWSYAK DLPGYPLDLK KAKALLTKAG
LAEGFSTTIW TRPSGSLLNP NPSLGAQMLQ ADLAKIGVKA EIRVIEWGEL IRRAKAGEHD
LLFMGWAGDN GDPDNFLSPQ FSCAAVESGT NFARFCDSRL DQLISAGRTT NDQSVRSRLY
QQAQTLIQQQ ALWVPLAHPT AATLLRQGVE GYQVSPFGRL DFSKVTVTK
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