| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5183 |
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| Symbol | |
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| ID | 5195264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5826741 |
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| End bp | 5828033 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640589666 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001270485 |
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| Protein GI | 148550383 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0718586 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCACA GCGCGCAGCA CGCCGCCTCC TATTACGCCG CCAGCAGCGC GCCACACCCC
GACCACGCCT ACCTGCAAGG CGAACACAAC GCCGACGTGT GCATCATCGG CGGCGGCTAC
TCCGGCCTGA ACACCGCCAT CGAGCTGGCC GAGCGTGGTT TCTCGGTCAT CCTGCTGGAA
GCGCGCAAAC TTGGCTGGGG CGCCAGTGGG CGCAATGGCG GGCAACTGAT CCGAGGGGTC
GGTCATGGTC TGGAGCAGTT CCTCCCGGTC ATCGGAGAAG AAGGCGTGCG CACCATGAAA
CTGATGGGCC TGGAGGCCGT ACAGATCGTG CGCGAGCGGG TAGAAAAGCA TGCCATCGCC
TGCGACCTGG CCTGGGGCTA CTGCGACCTG GCCAACAAAC CCGCCGAGCT GCTGGGCTTT
GCCCAAGACG CCGAGGAACT GCGCAGCCTG GGCTATGCAC ATGAGCTGCG GCTGGTCGGC
AAGGACGATA TCCACAGCGT GGTCGGTGCC GATTGCTACG TGGGCGGGTT GGTCGACATG
GGCTCCGGGC ATCTGCATCC GCTCAATCTG GCACTGGGTG AAGCCGCCGC AGCCGCCCGC
CTGGGCGTGA AGTTGTTCGA GCAATCCGAA GTCACCCGCA TCGACTACGG CACTGAAGTG
CAGGTGCATA CTGCCCAAGG CCGGGTACGC GCCAAGACCC TGGTACTGTG CTGCAACGCC
TACCACAACG ACCTCAATCG CGAGCTGGGC GGCAAGGTGC TGCCGGCCGG CAGCTACATC
ATCGCCACCG AGCCGCTGGG CGAAGAACGC GCACACGCCT TGCTGCCGCA GAATATGGCG
GTGTGTGACC AGCGCGTGGC GCTGGACTAC TACCGCCTGT CCGCCGACCA CCGCCTGCTG
TTTGGCGGTG CCTGCCACTA TTCAGGCCGC GACCCGAAGG ACATCGCCGC CTATATGCGG
CCGAAGATGC TCAAGGTGTT CCCGCAGCTT GCCGACGTGC GCATCGACTA CCAGTGGGGT
GGCATGATCG GCATTGGTGC CAATCGCCTG CCGCAGGTTG GCCGACTGGC CAGCCAGCCG
AACGTGTATT ACGCCCAGGC CTACTCGGGC CATGGGCTCA ACGCCACCCA CCTGGCCGCA
CGCCTGCTGG GTGAAGCCAT CAGTGGCCAG GAAAGCGGGC GCTTCGACCT TTTCAACAAG
GTGCCGCACA TCACCTTCCC TGGCGGCAAG CACCTGCGCT CGCCACTGCT GGCGCTGGGG
ATGCTGTGGC ATCGCCTGAA AGAGCTGGCC TGA
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| Protein sequence | MIHSAQHAAS YYAASSAPHP DHAYLQGEHN ADVCIIGGGY SGLNTAIELA ERGFSVILLE
ARKLGWGASG RNGGQLIRGV GHGLEQFLPV IGEEGVRTMK LMGLEAVQIV RERVEKHAIA
CDLAWGYCDL ANKPAELLGF AQDAEELRSL GYAHELRLVG KDDIHSVVGA DCYVGGLVDM
GSGHLHPLNL ALGEAAAAAR LGVKLFEQSE VTRIDYGTEV QVHTAQGRVR AKTLVLCCNA
YHNDLNRELG GKVLPAGSYI IATEPLGEER AHALLPQNMA VCDQRVALDY YRLSADHRLL
FGGACHYSGR DPKDIAAYMR PKMLKVFPQL ADVRIDYQWG GMIGIGANRL PQVGRLASQP
NVYYAQAYSG HGLNATHLAA RLLGEAISGQ ESGRFDLFNK VPHITFPGGK HLRSPLLALG
MLWHRLKELA
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