Gene Pput_5177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_5177 
Symbol 
ID5194365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5821858 
End bp5822280 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content62% 
IMG OID640589660 
Productcytochrome c5 
Protein accessionYP_001270479 
Protein GI148550377 
COG category[C] Energy production and conversion 
COG ID[COG3245] Cytochrome c5 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.129919 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.155967 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATCAAA TCAAGAAGAT GCTGGCCGTA CCAGCAGCCG TATTCGCCCT CTGGGCAATG 
AGCGCAACCG CTGCGACCAA TGACGACATC GCCAAGCGCC TGGAGCCGGT TGGCCAGGTG
TGCGTCCAGG GCCAGGAGTG CAAAGGCATG GAAGTGGCCG CTGCAGCGGG TGGCGGGGGA
GCCAAAACGC CGGATGAAAT CATCGCCAAG CACTGCAATG CCTGCCATGG CAGCGGCTTG
CTCGGCGCGC CTAAAATTGG TGACACCGCG GCGTGGAAAG AACGCGCCGA CCACCAGGGC
GGCCTGGATG GCATCCTGGC CAAGGCCATT ACTGGCATCA ACGCCATGCC GCCAAAGGGC
ACCTGTGCAG ACTGCTCGGA TGAAGACCTG AAAGGGGCGA TCAAGAAAAT GTCCGGGCTG
TGA
 
Protein sequence
MNQIKKMLAV PAAVFALWAM SATAATNDDI AKRLEPVGQV CVQGQECKGM EVAAAAGGGG 
AKTPDEIIAK HCNACHGSGL LGAPKIGDTA AWKERADHQG GLDGILAKAI TGINAMPPKG
TCADCSDEDL KGAIKKMSGL