Gene Pput_5143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_5143 
Symbol 
ID5195389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5776886 
End bp5777224 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content55% 
IMG OID640589626 
Productnitrogen regulatory protein P-II 
Protein accessionYP_001270445 
Protein GI148550343 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0347] Nitrogen regulatory protein PII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTAG TCACAGCCAT CATCAAGCCG TTCAAGCTGG ACGACGTGCG CGAGTCGTTG 
TCGGAAATCG GCGTGCAGGG CATCACCGTC ACCGAAGTCA AAGGTTTCGG TCGGCAGAAG
GGCCACACCG AACTGTATCG CGGTGCTGAA TATGTGGTCG ATTTCCTGCC CAAGGTGAAG
ATCGATGTCG CCATCGATGA CAAGGACCTT GATCGGGTAA TCGAAGCCAT CACCAAGGCA
GCCAACACCG GCAAGATTGG TGACGGCAAG ATTTTCGTGG TGAATCTGGA GCAGGCGATC
CGCATCCGTA CCGGCGAAAC CGATACCGAC GCGATCTAA
 
Protein sequence
MKLVTAIIKP FKLDDVRESL SEIGVQGITV TEVKGFGRQK GHTELYRGAE YVVDFLPKVK 
IDVAIDDKDL DRVIEAITKA ANTGKIGDGK IFVVNLEQAI RIRTGETDTD AI