Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_5130 |
Symbol | |
ID | 5195551 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 5765023 |
End bp | 5765511 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640589613 |
Product | hypothetical protein |
Protein accession | YP_001270432 |
Protein GI | 148550330 |
COG category | [S] Function unknown |
COG ID | [COG1671] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGGCG CATTGAGTTC ATGTAGAGAG TGTCCAATGC GTGTATGGAT CGATGCCGAC GCCTGCCCCA AGGCGGCCAA GGATCTGATC GTCAAGTTCG CCCTCAAGCG CAAGTTCGAG GTGGTGATGG TGGCGGGGCA GGCTGTGGCC AAGCCGGCGT TCGCGATCGT GCGTCTGATC GTGGTGCCCA GCGGCATGGA TGCGGCCGAC GATTACATTG TGGAGCACGC CGTGCCTGGC GAGCTGGTGA TCTGCAGTGA CGTGCCGCTG GCCGACCGTC TGGTGAAAAA GGGCGTGGCC GCATTGGACC CGCGTGGGCG TGAGTTCGAC GAGCGCAACA TGGGCGACCG CCTGGCGGCG CGCAACCTGT TCACCGAGCT GCGTGAGCAG GGCCAGGTGG GGGGCGGGCA GGCGGCCTAT GGCGAACGCG AGAAACAGGC GTTTGCCAAT GCACTGGACC GGATCATTGC CCGCCTCTCG AAAAGCTGA
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Protein sequence | MMGALSSCRE CPMRVWIDAD ACPKAAKDLI VKFALKRKFE VVMVAGQAVA KPAFAIVRLI VVPSGMDAAD DYIVEHAVPG ELVICSDVPL ADRLVKKGVA ALDPRGREFD ERNMGDRLAA RNLFTELREQ GQVGGGQAAY GEREKQAFAN ALDRIIARLS KS
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