Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_5122 |
Symbol | |
ID | 5191704 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 5754576 |
End bp | 5756042 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640589605 |
Product | UbiD family decarboxylase |
Protein accession | YP_001270424 |
Protein GI | 148550322 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGTATC GCGACTTGCG CGACTTCATC CGTGGCCTGG AACAGCGCGG AGAGCTCAAG CGCATCCAGG TACCGATCTC CCCCGTCCTG GAAATGACCG AGGTCTGCGA CCGCACCCTG CGCGCCAAGG GCCCGGCATT GTTGTTCGAA AAGCCCACCG GCTTCGACAT CCCAGTGCTG GGCAACCTGT TCGGTACTCC GGAGCGGGTG GCCATGGGCA TGGGCGCCGA GTCGGTCAGC GAACTGCGGG AAATCGGCAA GCTGCTGGCC TTTCTCAAGG AGCCCGAGCC GCCCAAGGGC CTGAAGGACG CCTGGTCGAA GCTGCCGATC TTCAAGAAGG TCGTGTCGAT GGCGCCAAAA GTGGTCAAGG ACGCGGTGTG CCAGGAAGTG GTGGTCGAGG GTGACGATGT CGACCTTGGC ACGCTGCCGA TTCAGCACTG CTGGCCTGGC GACGTGGCGC CGCTGATTAC CTGGGGCCTC ACCGTGACCC GTGGCCCGAA CAAGGACCGC CAGAACCTGG GCATCTACCG CCAGCAGGTG ATCGGCCGCA ACAAGGTGAT CATGCGCTGG CTCAGCCACC GTGGCGGCGC CCTCGACTAC CGAGAGTGGT GCGAGAAGAA CCCCGGCCAG CCGTTTCCGG TCGCCGTGGC CCTGGGCGCT GACCCAGCGA CCATTCTCGG CGCGGTGACC CCGGTCCCGG ACACCCTTTC CGAGTACGCC TTCGCCGGCC TGCTGCGAGG TAATCGCACC GAACTGGTCA AGTGCCGTGG CAGCAACCTG CAGGTACCGG CAACCGCCGA GATCATTCTG GAAGGGGTGA TCCACCCAGG CGAAATGGCC CCGGAAGGCC CTTACGGCGA TCACACGGGC TACTACAACG AAGTGGACAG TTTCCCGGTG TTCACCGTTG AGCGCATCAC CCACCGGCAA AAACCGATCT ACCACAGCAC CTACACCGGC CGGCCGCCAG ATGAGCCGGC CATTCTCGGC GTGGCGCTGA ACGAAGTGTT CGTGCCGATC CTGCAGAAGC AGTTCCCGGA AATCACCGAC TTCTACCTGC CGCCGGAAGG CTGCTCGTAC CGGATGGCGG TGGTGACCAT GAAGAAACAG TACCCAGGCC ACGCCAAGCG CGTAATGCTG GGTGTGTGGT CGTTCCTGCG ACAGTTCATG TACACCAAGT TCGTTATTGT CACCGATGAC GATATCAACG CTCGTGACTG GAACGATGTG ATCTGGGCCA TTACCACGCG CATGGACCCC AAGCGTGATA CGGTAATGAT TGACAATACC CCGATCGACT ACCTGGACTT TGCGTCACCG GTGTCGGGGC TGGGTTCGAA GATGGGCCTG GACGCTACGC ACAAGTGGCC GGGCGAGACT ACACGCGAAT GGGGCCGGGT CATCGTCAAG GATGAGGCCG TCACCCGCCG TATCGATGAG CTGTGGGATC AGTTGGGAAT AGATTGA
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Protein sequence | MQYRDLRDFI RGLEQRGELK RIQVPISPVL EMTEVCDRTL RAKGPALLFE KPTGFDIPVL GNLFGTPERV AMGMGAESVS ELREIGKLLA FLKEPEPPKG LKDAWSKLPI FKKVVSMAPK VVKDAVCQEV VVEGDDVDLG TLPIQHCWPG DVAPLITWGL TVTRGPNKDR QNLGIYRQQV IGRNKVIMRW LSHRGGALDY REWCEKNPGQ PFPVAVALGA DPATILGAVT PVPDTLSEYA FAGLLRGNRT ELVKCRGSNL QVPATAEIIL EGVIHPGEMA PEGPYGDHTG YYNEVDSFPV FTVERITHRQ KPIYHSTYTG RPPDEPAILG VALNEVFVPI LQKQFPEITD FYLPPEGCSY RMAVVTMKKQ YPGHAKRVML GVWSFLRQFM YTKFVIVTDD DINARDWNDV IWAITTRMDP KRDTVMIDNT PIDYLDFASP VSGLGSKMGL DATHKWPGET TREWGRVIVK DEAVTRRIDE LWDQLGID
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