| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5085 |
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| Symbol | |
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| ID | 5190995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5713545 |
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| End bp | 5714465 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640589568 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001270387 |
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| Protein GI | 148550285 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.358799 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.347676 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTGC GCAAGCTCAA GCGAGCCTTC CAGCGTCTGG TCCCGGAGGG GCGGCACTTG
GTGATCGGCG TGCCGTTCAT CTGGCTGTTC CTGTTCTTCA TGCTGCCGTT CTTCATCGTC
CTGAAGATCA GTTTTGCCGA AGCTGACGTG GCAATCCCGC CGTATACCGA GATCTATACC
TACGTCGAAG ACAAGATCCA GCTGGTCCTC AACCTGGCCA ACTACGGGCT GTTGACCGAG
GATGAGCTGT ACCTCTCGGC CTACCTGGGT TCGTTGAAGA TGGCGTTCTT CAGCACCCTG
CTGTGCCTGC TGATCGGCTT CCCGATGGCC TACGCCATTG CCAACGCCAA GAAGGAGACC
CAGACGGTCC TGCTGTTGCT GATCATGATG CCAACCTGGA CCGCGATCCT GATCCGCGTC
TATGCCTGGA TGGGTATCCT CAGCAACAAC GGCCTGCTCA ACGGTTTCCT CCTGTGGACC
GGGTTGATCG ACCAGCCGTT GCAGATCCTC AACACCAACC TGGCGGTCTA CATCGGCGTG
GTCTATTCGT ACCTGCCGTT CATGATCCTG CCGCTGTTCG CCAACCTGGT GAAGCATGAT
CCGAGCCTGC TCGAAGCTGC ATCCGACCTG GGTTCGAGCA CCTTCAACAG CTTCTGGAAG
ATCACGGTAC CGCTGTCGAA AAACGGCATC ATCGCCGGCT GCATGCTGGT GTTCATCCCG
GTGGTGGGCG AGTTCGTGAT CCCGGAACTG CTGGGTGGCC CGGAAACCCT GATGATCGGT
AAAGTGCTGT GGCAGGAGTT CTTCAACAAC CGTGACTGGC CGGTGGCATC CGCCCTGGCA
GTGGTGATGC TGGCGATCCT GATCGTGCCG ATCCTGCTGT TCAACCGTAG CCAGGCCAAA
GAGATGGAGG GCCGCGCATG A
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| Protein sequence | MKLRKLKRAF QRLVPEGRHL VIGVPFIWLF LFFMLPFFIV LKISFAEADV AIPPYTEIYT
YVEDKIQLVL NLANYGLLTE DELYLSAYLG SLKMAFFSTL LCLLIGFPMA YAIANAKKET
QTVLLLLIMM PTWTAILIRV YAWMGILSNN GLLNGFLLWT GLIDQPLQIL NTNLAVYIGV
VYSYLPFMIL PLFANLVKHD PSLLEAASDL GSSTFNSFWK ITVPLSKNGI IAGCMLVFIP
VVGEFVIPEL LGGPETLMIG KVLWQEFFNN RDWPVASALA VVMLAILIVP ILLFNRSQAK
EMEGRA
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