Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_5060 |
Symbol | |
ID | 5190780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 5687745 |
End bp | 5688410 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640589543 |
Product | fumarylacetoacetate (FAA) hydrolase |
Protein accession | YP_001270362 |
Protein GI | 148550260 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTACC AGCACCAGTA CGTAGACGGC ACGCGCATTC ACTTCCCCCT GGGCAAGGTG GTGTGCATCG GCCGTAACTA TGCCGAGCAT GCCAAGGAAC TGGACAACCC GATCCCCACC GAGCCGCTGC TGTTCATCAA GCCAGGCAGC TGCGTGGTGC CGGCCGAAGG TGGCTTCAAG ATCCCGGCCG AGCGAGGGTC GGTGCACTAT GAAGTTGAAA TTGCCGTGCT GCTGGGCAAG CCGCTGTCGA CCCACCCGAG CGAGGAAGAG GTGCTGGACG CCATTTCCGG TTACGCACCG GCGCTGGACC TGACCCTGCG CGACGTGCAG GCCAAACTGA AGGAAAAGGG CCTGCCCTGG GAGCTGGCCA AGTGCTTTGA CGGCGCTTGC GTGCTGCCAC CGTTCGTCTC GGCCGCCAGC TTTGAGGACG TGACAGACAT CCCGGTGCGC CTGACCGTGA ACGGCGAAGT GCGCCAGGAG GGTAACAGCG CGATGATGCT GAACCCGATC GTGCCGATGA TCCAGTACAT GGCAGCGCAT TTCTCGCTAC AAGCGGGGGA TGTAATCCTC ACCGGTACCC CGGCGGGTGT TGGGCCGTTC AATGTCGGTG ACGAGCTGGT GCTGGAACTG CCGGGTGTGA GCCGCTTCGA AAGCCGGGTG CTTTAA
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Protein sequence | MSYQHQYVDG TRIHFPLGKV VCIGRNYAEH AKELDNPIPT EPLLFIKPGS CVVPAEGGFK IPAERGSVHY EVEIAVLLGK PLSTHPSEEE VLDAISGYAP ALDLTLRDVQ AKLKEKGLPW ELAKCFDGAC VLPPFVSAAS FEDVTDIPVR LTVNGEVRQE GNSAMMLNPI VPMIQYMAAH FSLQAGDVIL TGTPAGVGPF NVGDELVLEL PGVSRFESRV L
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