Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_5012 |
Symbol | |
ID | 5192919 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 5634760 |
End bp | 5637012 |
Gene Length | 2253 bp |
Protein Length | 750 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640589497 |
Product | heavy metal translocating P-type ATPase |
Protein accession | YP_001270316 |
Protein GI | 148550214 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2217] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase [TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.530784 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCAGC CTGTCAGCCA CGAACACAAG CATCCGCACG ATCACGCTCA TGGTGATGAC GACCATGGCC ATGCTGCCCA CGGCCACAGC TGCTGCGGCG CCAAAGCCGC GCCGCCGCTG GTGCAACTGA GCGAAACGGC CAGTGCCCAG GCACAACTCA GTCGTTTCCG CATCGATGCC ATGGACTGCC CCACCGAGCA GAACCTGATT CAGGACAAAC TGAGCAAGCT GGCCGGTATC GAACAGCTGG AATTCAACCT GATCAACCGC GTGCTTGGCG TGCGCCACAC CTTGGACGGC ACCGCCGATA TCGAGCGGGC TATCGACAGC CTGGGCATGA AGGCCGAGCC GATTGCCGCC CAGGACGACG GCAGCGCCAG CGTGCCCCAA CCGGCCAAGG CCCGCTGGTG GCCACTGGCA TTGTCGGGCG TCGCCGCGAT CGCCGCCGAA ATCGTGCACT TTGCTGCACT GGCCCCTGAG TGGGTGGTAG CGGGACTGGC GCTTGCCGCG ATCCTCGGTT GCGGCCTGGG TACCTACAAG AAGGGCTGGA TTGCCCTGAA AAACCGTAAC CTCAACATCA ATGCGCTGAT GAGTATCGCC GTGACGGGGG CCGTATTGAT CGGCCAGTGG CCGGAGGCGG CGATGGTCAT GGTGCTCTTC ACCGTTGCCG AACTGATCGA AGCGCGCTCG CTGGACCGTG CGCGCAATGC CATCGGCGGG TTGATGCAGC TGACCCCGGA CGTGGCTACG GTGCAGCAGG CCGATGGCCA GTGGCGCGAG CTGGAAGTGC GTGAGGTGGC CATCGGCGCA CTGGTTCGGG TGCGCCCCGG TGAGCGCATC GGCCTGGACG GTGAAGTGAC CAGCGGGCAA TCCAGCGTCG ATCAGGCGCC GATTACCGGC GAAAGCCTGC CTGTGGAGAA GGGGGTGGGC GACAAGCTGT TCGCTGGCAC CATCAACCAG GCGGGGGCGC TGGAGTTTCG CGTCACCGCC GCTGCCGGGC AGTCGACCCT GGCGCGGATC ATCAAGGCTG TGGAGGAAGC GCAGGGCGCG CGGGCGCCTA CCCAACGCTT CGTCGACCGT TTCTCGCGTA TCTACACCCC GGTGGTATTC GCCATTGCCC TGGCCGTGGC GCTGTTGCCC CCGCTGTTCA TGGCTGGCGC CTGGTTCGAC TGGGTTTACC GCGCCTTGGT GCTGCTGGTG GTGGCCTGCC CCTGCGCGCT GGTGATCTCG ACCCCGGTGA CCATCGTCAG TGGCCTGGCC GCCGCTGCGC GCAAAGGCAT CCTGATCAAG GGTGGCGTGT ACCTGGAGGG TGGCCGCCAC CTGGATTTCC TGGCCCTGGA CAAGACCGGC ACCATTACCC ATGGCAAGCC GGTGCAGACT GACGCCAAGG TGCTGGCGCC GCTGTTCGAA GACCGTGCGC AAGCCTTGGC GGCCAGCCTG GGCGAGCGTT CGGACCACCC GGTGTCCCGC GCCATTGCCG AGTTCGGCAA GCAGCAAGGC CTGGCCTTGA GCGAGGTCAG TGACTTCGCC GCCCTGGCCG GGCGTGGCGT GCGTGGTGTC ATCGCCGGTG AGGTCTACCA CTTGGGCAAC CACCGCCTGG TCGAGGAACT GGGGCTGTGT TCGCCAGCGC TGGAGGCCCA GCTTGATGCG CTGGAGCGCC AGGGCAAGAC CGTGGTCCTG CTGCTCGACC GATCCGGCCC TCTGGCACTG TTCGCCGTGG CCGACACGGT CAAGGACAGC AGCCGTCAGG CGATCGCCGA ATTGCATCAA CTGGGTATCA AGACTGTCAT GCTGACCGGT GACAATCCGC ATACTGCGCA GGCCATTGCC GCCGTGGTGG GGATCGACCG CGCCGAGGGC AACCTGTTGC CGGCCGACAA GCTGAAAACC ATTGAGGCGT TGTACGCCCA AGGCCATCGG GTAGGCATGG TCGGTGACGG CATCAACGAC GCCCCGGCGC TGGCCCGCGC CGAAATCGGT TTTGCCATGG CTGCTGCCGG CACCGACACC GCCATCGAGA CGGCTGATGT GGCGCTGATG GACGATGACT TGCGCAAAAT CCCGGCCTTC GTCAGGCTGT CGCGCCAAAG TGCGGCGATC CTCATGCAGA ACATCGTTCT GGCGTTGGGC ATCAAGGCGA TATTTCTGGC GATCACCTTT GCCGGCATGG CCACGATGTG GATGGCGGTG TTCGCTGATA TGGGCGTGAG CTTGCTGGTG GTGTTCAACG GCTTGCGCCT TTTGCGCAAA TAG
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Protein sequence | MNQPVSHEHK HPHDHAHGDD DHGHAAHGHS CCGAKAAPPL VQLSETASAQ AQLSRFRIDA MDCPTEQNLI QDKLSKLAGI EQLEFNLINR VLGVRHTLDG TADIERAIDS LGMKAEPIAA QDDGSASVPQ PAKARWWPLA LSGVAAIAAE IVHFAALAPE WVVAGLALAA ILGCGLGTYK KGWIALKNRN LNINALMSIA VTGAVLIGQW PEAAMVMVLF TVAELIEARS LDRARNAIGG LMQLTPDVAT VQQADGQWRE LEVREVAIGA LVRVRPGERI GLDGEVTSGQ SSVDQAPITG ESLPVEKGVG DKLFAGTINQ AGALEFRVTA AAGQSTLARI IKAVEEAQGA RAPTQRFVDR FSRIYTPVVF AIALAVALLP PLFMAGAWFD WVYRALVLLV VACPCALVIS TPVTIVSGLA AAARKGILIK GGVYLEGGRH LDFLALDKTG TITHGKPVQT DAKVLAPLFE DRAQALAASL GERSDHPVSR AIAEFGKQQG LALSEVSDFA ALAGRGVRGV IAGEVYHLGN HRLVEELGLC SPALEAQLDA LERQGKTVVL LLDRSGPLAL FAVADTVKDS SRQAIAELHQ LGIKTVMLTG DNPHTAQAIA AVVGIDRAEG NLLPADKLKT IEALYAQGHR VGMVGDGIND APALARAEIG FAMAAAGTDT AIETADVALM DDDLRKIPAF VRLSRQSAAI LMQNIVLALG IKAIFLAITF AGMATMWMAV FADMGVSLLV VFNGLRLLRK
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