Gene Pput_5005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_5005 
Symbol 
ID5191762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5626228 
End bp5626743 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content63% 
IMG OID640589490 
Productdihydrofolate reductase 
Protein accessionYP_001270309 
Protein GI148550207 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0262] Dihydrofolate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACAT CACTCCCCCT CAGCCTGATC GCGGCTTATG CCGAGAACCG CGTGATCGGC 
ATCGACAACT CCATGCCCTG GCATTTGCCG GGGGACTTCA AGTACTTCAA GGCCACCACC
CTGGGCAAGC CGATCATCAT GGGGCGCAAG ACCTGGGACT CGCTGGGGCG GCCGCTGCCT
GGGCGGCTGA ACATCGTGGT CAGCCGCCAG CCGGGGCTTG AGCTTGCAGG TGCCGAAGTG
TTCGCCTCGC TTGAAGAGGC GTTGGTGCGG GCCGAGCAGT GGGCGCGCGA GCAGGGCGTC
GGTGAGCTGA TGCTGATTGG TGGGGCGCAG CTGTATGGGC AGGCGCTGGA GAAGGGGCTG
GTCAGCCGCA TGTATCTGAC GCGGGTTGAG TTGGCGCCAG AGGGGGATGC GTGGTTCCCG
GCGTTTGATG AAGGGCAGTG GAGGCTGACT TCTAGCGAGG CACAGGCTGA GGAAGGTAAG
CCGGTGTATC ACTTCGAGGT TTGGGATAAG GGTTGA
 
Protein sequence
MNTSLPLSLI AAYAENRVIG IDNSMPWHLP GDFKYFKATT LGKPIIMGRK TWDSLGRPLP 
GRLNIVVSRQ PGLELAGAEV FASLEEALVR AEQWAREQGV GELMLIGGAQ LYGQALEKGL
VSRMYLTRVE LAPEGDAWFP AFDEGQWRLT SSEAQAEEGK PVYHFEVWDK G