Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_5001 |
Symbol | |
ID | 5195440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 5619837 |
End bp | 5621033 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640589486 |
Product | hypothetical protein |
Protein accession | YP_001270305 |
Protein GI | 148550203 |
COG category | [R] General function prediction only |
COG ID | [COG1092] Predicted SAM-dependent methyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.397476 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCTGC CCAGCCTTCG CCTCAAAGCC AATGCCGACC GCCGCCTGCG CGCCGGCCAC CTGTGGGTCT ACAGCAACGA AGTCGATGTC AGCGCGACCC CTTTGCAAGG CTTCCAGGCG GGTCAGCAGG CCATTCTCGA GGCAGCCAAC GGCAAGCCGC TGGGCATCGT CGCACTGAGC CCGAACAACC TGATCTGCGC CCGCCTGCTG TCACGCGACA TCAAGCTGCC GCTGGACAAG TCGCTGCTGG TACACCGCCT GAATGTCGCC CTGTCGCTGC GCGAGCGCCT GTTCGACCAG CCGTGCTACC GCCTGGTCTA CGGTGACTCC GACCTGCTCC CAGGCCTGGT GGTCGACCGT TTCTTCGATA TCCTCGTGGT GCAGTTGGCC TCGGCCACCA TGGAAGCGCA CAAGGATGAC GTGATCGCCG CACTGGTGCA GGTGCTCAAG CCCAGCGGCA TCCTGTTCAA GAACGATTCG GCCGCGCGCG ATGCCGAAGG CCTGCAGCGC TATGTCGAGA CCGTCTACGG CGAAGTGCCG GACTGGGTGC CGCTGGAAGA GAACGGCGTC AAGTTCGAAG CCCCGGTGCG CGAAGGCCAG AAGACGGGCT GGTTCTACGA CCACCGCATG AACCGCGCCC GCCTGGCACC GTACGTGAAG GGCAAGCGTG TACTCGACCT GTTCAGCTAT ATCGGTGGCT GGGGCGTACA GGCCGGTGCC TTCGGCGCCA GCGAAGTGTT CTGTGTCGAT GCCTCGGGCT TTGCCCTGGA CGGCGTGGAG CGTAACGCTG CACTGAACGG CATCAGCGAG AAGCTGACCT GCATCGAAGG CGACGTGTTC GAAGCCCTGC GCGAGCTCAA GGCGGCCGAA GAACGCTTCG ACGTGATCAT TGCCGACCCA CCTGCCTTCA TCAAGCGCAA AAAAGACCTG AAAAACGGCG AAGCGGCCTA CCGCCGCCTG AACGAGCAGG CCATGCGCAT GTTGAACAAA GACGGCATCC TCGTCAGCGC CTCGTGCTCG ATGCACCTGC CCGAGGACGA CCTGAACAAC ATCCTGCTGA CCAGCGCCCG CCACCTGGAC CGCAACATGC AGCTGCTCGA GCGAGGCGGT CAGGGCCCGG ATCACCCGGT ACACCCGGCC ATCGCCGAAA CCCGCTACAT CAAAAGCATC ACCTGCCGGT TACTGCCAAA CAGCTGA
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Protein sequence | MSLPSLRLKA NADRRLRAGH LWVYSNEVDV SATPLQGFQA GQQAILEAAN GKPLGIVALS PNNLICARLL SRDIKLPLDK SLLVHRLNVA LSLRERLFDQ PCYRLVYGDS DLLPGLVVDR FFDILVVQLA SATMEAHKDD VIAALVQVLK PSGILFKNDS AARDAEGLQR YVETVYGEVP DWVPLEENGV KFEAPVREGQ KTGWFYDHRM NRARLAPYVK GKRVLDLFSY IGGWGVQAGA FGASEVFCVD ASGFALDGVE RNAALNGISE KLTCIEGDVF EALRELKAAE ERFDVIIADP PAFIKRKKDL KNGEAAYRRL NEQAMRMLNK DGILVSASCS MHLPEDDLNN ILLTSARHLD RNMQLLERGG QGPDHPVHPA IAETRYIKSI TCRLLPNS
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