| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4999 |
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| Symbol | |
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| ID | 5192589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5618027 |
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| End bp | 5618839 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640589484 |
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| Product | formamidopyrimidine-DNA glycosylase |
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| Protein accession | YP_001270303 |
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| Protein GI | 148550201 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
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| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGAAT TGCCAGAAGT AGAAACCACC CGGCGCGGTA TTGCGCCACA CCTGGAAGGC
CAGCGCGTCA GCCGTGTGGT GGTACGCGAC CGGCGTCTGC GCTGGCCGAT TCCGGAAGAC
CTCGATGTGC GCCTGTCAGG GCAGCGCATC GTCAGCGTGG AGCGACGTGC CAAGTACCTG
TTGATCAATG CCGAAGTGGG TACGCTGATC AGCCACTTGG GCATGTCGGG CAACCTGCGG
CTGGTCGAGC TGGGCTTGCC GGCGGCCAAG CATGAGCATG TCGACATCGA GCTGGAGTCC
GGGCTGATGC TGCGCTACAC CGACCCACGC CGCTTTGGTG CCATGCTGTG GAGCCTGGAC
CCTCTGAACC ATGAGCTACT GCTGCGCTTG GGGCCTGAGC CGCTGACCGA CCTGTTCGAT
GGTGAACGGC TGTTCCAGCT GTCCCGCGGG CGGTCGATGG CGGTCAAGCC GTTCATCATG
GACAACGCGG TGGTGGTAGG GGTGGGCAAC ATCTACGCCA CCGAGGCGCT GTTTGCCGCC
GGTATCGACC CACGCCGGGA GGCGGGCGGG ATTTCCCGGG CGCGCTACCT GAAACTGGCG
ATCGAGATCA AACGGGTGCT GGCGGCGGCC ATCGAGCAGG GCGGTACCAC CCTGCGCGAC
TTTATCGGTG GCGACGGGCA GCCGGGGTAC TTCCAGCAGG AACTGTTTGT GTACGGGCGT
GGCGGACAGC CGTGCAAGGT ATGCGGCACT GAGTTGCGCG AAGTGAAGCT GGGGCAGAGG
GCGAGCGTGT ACTGCCCGCG CTGCCAACGC TGA
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| Protein sequence | MPELPEVETT RRGIAPHLEG QRVSRVVVRD RRLRWPIPED LDVRLSGQRI VSVERRAKYL
LINAEVGTLI SHLGMSGNLR LVELGLPAAK HEHVDIELES GLMLRYTDPR RFGAMLWSLD
PLNHELLLRL GPEPLTDLFD GERLFQLSRG RSMAVKPFIM DNAVVVGVGN IYATEALFAA
GIDPRREAGG ISRARYLKLA IEIKRVLAAA IEQGGTTLRD FIGGDGQPGY FQQELFVYGR
GGQPCKVCGT ELREVKLGQR ASVYCPRCQR
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