| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4981 |
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| Symbol | |
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| ID | 5194134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5598557 |
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| End bp | 5599411 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640589466 |
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| Product | RNA polymerase factor sigma-32 |
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| Protein accession | YP_001270285 |
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| Protein GI | 148550183 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACAT CGTTGCAACC TGCCTATGCC CTGGTACCCG GTGCAAACCT GGAAGCCTAT
GTGCACACGG TCAACAGCAT CCCGCTGCTG ACGGTCGAGC AGGAGCGTGA TCTGGGCGAG
CGTCTCTATT ATGAGCAGGA TGTCGAGGCC GCTCGTCAGA TGGTGATGGC CCACCTGCGT
TTCGTCGTAC ATATCGCCCG TAGTTATGCC GGCTACGGGT TGGCCCAGGC TGACCTGATC
CAGGAAGGCA ATGTCGGCCT GATGAAAGCC GTCAAGCGCT TCAACCCGGA AATGGGCGTG
CGCCTGGTGT CGTTCGCTGT GCACTGGATC AAGGCAGAGA TCCACGAGTT CATTCTGCGC
AACTGGCGCA TCGTCAAAGT GGCTACCACC AAGGCTCAGC GCAAGCTGTT CTTCAACCTG
CGTAGCCAGA AGAAGCGCCT GGCGTGGCTG AACAACGACG AAGTGCATCG CGTGGCGGAA
AGCCTTGGCG TCGAGCCGCG CGAAGTGCGC GAGATGGAAA GCCGTCTTAG CGGCCAGGAC
ATGGCCTTCG ATCCGGCAGC GGAAGCTGAC GACGACAGCG CCTTCCAGTC GCCTGCGCAT
TACCTGGAAG ACCACCGTTA CGATCCAGCG GTGCAGTTGG AGGATGCCGA CTGGAGTGAC
AACTCCACCA GCAACCTGCA CGAAGCGCTG CAAGGTCTGG ACGAGCGTAG CCGCGACATT
CTCTATCAGC GTTGGCTGGC GGAAGAGAAG GCCACCCTGC ATGAACTGGC AGACAAGTAC
AGCGTATCGG CTGAGCGTAT TCGCCAGCTG GAGAAGAATG CGATGAACAA GGTCAAGGCA
CTGATTTCTG CCTGA
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| Protein sequence | MTTSLQPAYA LVPGANLEAY VHTVNSIPLL TVEQERDLGE RLYYEQDVEA ARQMVMAHLR
FVVHIARSYA GYGLAQADLI QEGNVGLMKA VKRFNPEMGV RLVSFAVHWI KAEIHEFILR
NWRIVKVATT KAQRKLFFNL RSQKKRLAWL NNDEVHRVAE SLGVEPREVR EMESRLSGQD
MAFDPAAEAD DDSAFQSPAH YLEDHRYDPA VQLEDADWSD NSTSNLHEAL QGLDERSRDI
LYQRWLAEEK ATLHELADKY SVSAERIRQL EKNAMNKVKA LISA
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