| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4961 |
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| Symbol | |
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| ID | 5191894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5581140 |
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| End bp | 5583359 |
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| Gene Length | 2220 bp |
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| Protein Length | 739 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640589446 |
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| Product | primosome assembly protein PriA |
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| Protein accession | YP_001270265 |
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| Protein GI | 148550163 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCGACG TCATCCTGCG CCTTGCCCTG CCCTCTCCGC TGCGGCGCCT GTTCGACTAC
AAGGCGCCGG CGAGCATGGC GCGCCAGACC TTGACCCCTG GCATGCGCAT CCGCGTGCCC
TTTGGCCGCC GCGAAATGAT CGGCGTGCTG ATAGAGGTGT GCACGCAGAG CGAAGTGCCC
GCCGACAAAC TGAAGCCGGC CACTGCCCTG CTCGACCCGG TGTCCCCCAT CCCCGCGTCG
CTGTTCAAGC TGTGCCTGTG GACCGCCCAG TACTACCAGC ACAGCCTGGG CGATACCCTG
AGCTGGGCGC TGCCCACGCT ACTGCGCCAG GGCGAAGCTG CCGAAATGCG CCAGGAACGC
TTCTGGCACA TAGCCCCTGG CGCCCGCCTG GAGGACCCGC GCATCGCCCG CGCGCCGCGC
CAGCGCGACG CCCTCAAGAC CCTGGCCCAG CACCCGCACG GCGTGGCCCA CAGCCTGCTG
GCCAAACTCA ACCTGAACAA GGACAGCCTC GACCTGCTGC TGGCCAAGGA CCTGGTGCAG
ATCGAGACGC GCCGCCACTT GCCGGCCCTG CGCCATGAGC ACTGGCTGGC ACAGCCGGAA
CTCCCCCTCA ACGAAGAGCA ACGCGATGCC TTCGACGCCG TGTGCGAGGG CTTTGGCGGT
TTCGGCGCGT TCTTGCTGGC CGGCGTCACC GGCAGTGGCA AGACCGAGGT CTACCTGCAA
CTGATCCGCG AAACCCTGGA AGCCGGCAAG CAGGCGCTGG TGCTGATCCC GGAGATCAAC
CTCGGCCCGC AAACCCTGGC CCGCTTCGAG CAACGCTTCA ACGCGCGCAT TGCCCTGCTG
CACTCTGCGG TGAACGACCG CGAACGCCTG GATGCCTGGC TGGCGGCACG GGACGGCGAG
GCCGATATCA TCATCGGCAC CCGCTCGGCA TTGTTCACGC CGATGAAAAA CCCCGGCCTG
ATCATCATCG ACGAAGAGCA CGACGGCTCC TATAAACAGC AGGAAGGCCT GCGGTACCAC
GCCCGCGACC TGGCGCTGGT ACGCGCTCAC CAGGAGAACA TCCCGATCCT GCTCGGCTCC
GCCACACCGT CGCTGGAAAC CCTGCATAAC GCCCTGACCG GCCGCTACCG GCTGCTGCGT
ATGAACCAAC GCGCCGGGGG GGCACGCCCG CCGCGCATGC TGCGCCTTGA TGTGAAGAGC
CTGCCACTGG ACAGCGGCAT CAGCGGCCCG CTGCAGCAGG CTATCCGACA GACCCTGGAG
GCTGGCCAAC AAGTGCTGGT GTTCCTCAAC CGCCGCGGCT TTGCCCCAAC CTTGCTGTGC
CACGATTGCG GCTGGCTGTC CGAATGCCCA CGCTGCGATG CGCGCATGAC CGTGCACCAG
CGCTCCGGCG TGCTGCGCTG CCACCACTGT GGCTATGACG AACGCCTGCC GCACCAGTGC
CCGCAATGCA ACCACGTCGA CCTGCGCCCG GTTGGTGCCG GTACCGAGCG CGCCGAAGAG
CGCCTGAAGG TGCTGTTCCC GGATTACCCG ATCCTGCGCG TGGACCGCGA CAGCACGGCG
CGCAAGGACG CCATGCACAA CCTGTTCAGC ACCATCCAGC GCGGCCAGCC AAGCATCCTC
GTCGGCACCC AGATGCTCGC CAAGGGCCAC CACTTCCCGC GGGTGACCCT GGTGGCCATC
CTTGATGCCG ATGGCGGGCT GTTTTCCGGT GACTTCCGCG CCAGCGAGCG CATGGCACAA
CTTATCGTAC AGGTGGCCGG GCGGGCCGGG CGGGCCGAAG AACCCGGCAA GGTCATCATC
CAGACCCACC TGGCCGACCA CCCACTGTTG GTCCAGCTAA CCGAGCAAGG CTACTTCGCC
TTCGCCGAAC AGGCCCTGGA CGAACGCCGA GCCGCCGGGC TGCCGCCCTA CTCGCACCTG
GCCTTGCTGC GTGCCGAAGC ACACAAGCCG GGGCAGGCCG AAGGTTTCCT CGACGAAGCC
TGTGCCGCCG CCGAGCGCCT GGTGGCCGAA CAGCACCTGC CGGGCATCGA ACTGCTGGGC
CCGGTACCGG CGCCCATGGA GCGCCGCGCC GGACGATTCC GCGCACAATT GTTGATACAG
GCCAATACCC GGGCGCCGTT GCATCGACTG ATCAGCGCCT GGTTGCTAGT GTTGGAACAG
TTGCCGAGCG GGCGCCAGGT GCGCTGGTCG CTGGATGTCG ACCCGGTAGA CCTGTATTGA
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| Protein sequence | MSDVILRLAL PSPLRRLFDY KAPASMARQT LTPGMRIRVP FGRREMIGVL IEVCTQSEVP
ADKLKPATAL LDPVSPIPAS LFKLCLWTAQ YYQHSLGDTL SWALPTLLRQ GEAAEMRQER
FWHIAPGARL EDPRIARAPR QRDALKTLAQ HPHGVAHSLL AKLNLNKDSL DLLLAKDLVQ
IETRRHLPAL RHEHWLAQPE LPLNEEQRDA FDAVCEGFGG FGAFLLAGVT GSGKTEVYLQ
LIRETLEAGK QALVLIPEIN LGPQTLARFE QRFNARIALL HSAVNDRERL DAWLAARDGE
ADIIIGTRSA LFTPMKNPGL IIIDEEHDGS YKQQEGLRYH ARDLALVRAH QENIPILLGS
ATPSLETLHN ALTGRYRLLR MNQRAGGARP PRMLRLDVKS LPLDSGISGP LQQAIRQTLE
AGQQVLVFLN RRGFAPTLLC HDCGWLSECP RCDARMTVHQ RSGVLRCHHC GYDERLPHQC
PQCNHVDLRP VGAGTERAEE RLKVLFPDYP ILRVDRDSTA RKDAMHNLFS TIQRGQPSIL
VGTQMLAKGH HFPRVTLVAI LDADGGLFSG DFRASERMAQ LIVQVAGRAG RAEEPGKVII
QTHLADHPLL VQLTEQGYFA FAEQALDERR AAGLPPYSHL ALLRAEAHKP GQAEGFLDEA
CAAAERLVAE QHLPGIELLG PVPAPMERRA GRFRAQLLIQ ANTRAPLHRL ISAWLLVLEQ
LPSGRQVRWS LDVDPVDLY
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