| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4957 |
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| Symbol | |
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| ID | 5194437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5575852 |
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| End bp | 5578305 |
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| Gene Length | 2454 bp |
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| Protein Length | 817 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640589442 |
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| Product | 1A family penicillin-binding protein |
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| Protein accession | YP_001270261 |
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| Protein GI | 148550159 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATACGTC TGCTGAAGTT CTTCTGGTGG TCTTCCGTCG CAGTCATCTG CGCGCTCGTA
CTCGGTGTGA GCGGTGCGTT TCTGTATCTT AGTCCCAGCC TGCCCTCGGT CGAGTCCCTC
AGAAGCATCC AGTTGCAGAT CCCCCTCAGG GTGTACAGCA GCGATGGCAA GCTGATTGCC
GAATTCGGCG AAATGCGCCG CTCGCCGATC CGCTTCGCGG AAATTCCCCC ACAATTCATT
CAGGCGTTGC TGTCAGCCGA GGACGACAAT TTCCTCAACC ACTACGGTGT CGACCCCAGC
AGCCTGATGC GCGCCGCGAC CCAGCTGGTG AAAACCGGGC ATATCCAGAC CGGCGGCAGC
ACCATTACCA TGCAGGTGGC GAAGAACTTC TTCCTCACCA GCGAACGCAG CTTCTCACGC
AAGACCAACG AAATCCTGCT GGCCCTGCAG ATCGAGCGTG AGCTGACCAA GGACGAAATC
CTTGAGCTGT ACGTGAACAA GATCTACCTG GGCAACCGCG CCTACGGTAT CGATGCAGCA
GCACAGGTGT ATTACGGCAA GTCCATCCGT GACGTGAGCC TGGCGCAGAT GGCGATGATC
GCCGGCCTGC CCAAGGCACC GTCGCGCTTC AACCCGCTGG CCAACCCGGT GCGCGCCAAA
GAGCGCCGCG ACTGGATCCT TGGGCGCATG TACAAGCTGG GTAAAATCGA CCAGGCCAGC
TACGAGGCCG CCCTGGCCGA GCCGCTCAAC GCCAGCTATC ACGTGCCGAC GCCTGAGGTG
AATGCCCCGT ACATCGCCGA AATGGCCCGC GCGGAAATGG TCGGCCGCTA CGGCAGCGAC
GCCTACACCG AAGGCTTCCG CGTCACGACC ACCGTGCCTA GCGACATGCA GGAAATGGCC
AACAAGGCCG TCCTCAAGGG CCTCTCCGAT TACGATGAGC GCCACGGCTA CCGTGGCCCT
GAAGCACGCT TCCCGGGCCG CACCCAGGCA GCGTGGCTGC AGGAACTGGG CAAGCAACGC
ACCCTTGGCG GCCTGGAGCC AGCCATTGTC ACCCAGGTGG AACACACCGG CCTCAAGGTG
CTGACCCGTG ACGGCCAAGA GGCGCAGGTT GCCTGGGACA CCATGAAATG GGCGCGCCCG
TTCATCAACA ACAACGCCCA GGGCCGCTCA CCGCAATCGC CGGCCGACGT GGCCCAGGTC
GGTGACCTGG TGCGCCTGCA ACGCCTTGAC GATGGCACAT TGAAGTTCAG CCAGGTGCCC
GTTGCGCAGA GTGCCCTGGT CACCCTCGAC CCGAACAACG GCGCCATCCG CGCCCTGGTC
GGCGGTTTCT CGTTCGAACA GAGCAACTAC AACCGCGCCG TGCAGGCCAA GCGCCAACCG
GGCTCGAGTT TCAAACCCTT CATCTACAGC GCCGCGCTGG ACAGCGGCTA CACCGCTTCC
AGCCTGGTCA ACGATGCGCC GATCGTGTTC GTTGACGAGT CGGTGGATAA AGTGTGGCGA
CCGAAGAACG ATACCAACAC CTTCCTCGGC CCTATCCGCA TGCGTGAGGC GCTGTACAAG
TCACGCAACC TGGTGTCGAT CCGCCTGCTG CAAGCCATGG GCGTGGACCG CACCATCGAC
TACATCGCCA AGTTCGGCTT CAACAAGCAG GACCTGCCGC GCAACCTGTC GCTGGCCCTG
GGCACCGCCA CCCTGACCCC GATGGAGATC GCCACCGGCT GGAGCACCTT TGCCAACGGC
GGGTACAAGA TCACCCCGTA CCTGATCGAG CGCATCGAGA GCCGCAGCGG CGAGACACTG
TTCACCGCCA ACCCGGCCCG CGTACCGCAA GGTGCCCAAG ACCAGGCGGG CCTGGCCGCA
CCCGAGCAGC CAATCAGCAC TGCGGCCATG CCAGGCGAAG CACCTTCTGC CTTCAGCCAG
GTGGCCGCGG CACCGCAAGC GCCGGCAGTG GCCGAACAGA TCATCGACGG GCGTACCACC
TACATCCTCA CCAGCATGCT GCAGGACGTG ATCAAGCGCG GCACCGGCCG CCGGGCGCTG
GCCTTGGGCC GCACCGACCT GGCGGGCAAG ACGGGTACGA CCAACGAATC CAAGGACGCC
TGGTTCTCCG GTTACAACGC CGATTACGTG ACTACCGTTT GGGTCGGCTT CGACCAACCG
GAAACCCTCG GCCGCCGCGA ATATGGCGGG ACTGCGGCAC TGCCGATCTG GATGAACTTC
ATGGGCGCGG CGCTCAAGGA CAAGCCTGCG CATGCCCCGG CAGAGCCGGA GGGCATTCTC
AGCTTGCGCG TCGACCCGGT CAGCGGGCGC GCGGCATCGC CGAGCACCCC GAATGCCTAC
TTCGAGCTGT TCAAAGCCGA AGATTCGCCG CCGTCGGTGG ACGAGCTGGG CAATGGCGCG
GCACCGGGCA GCCCGCTGCC AGCCGATGAA GCGACGCCGA TGGATCTGTT CTAA
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| Protein sequence | MIRLLKFFWW SSVAVICALV LGVSGAFLYL SPSLPSVESL RSIQLQIPLR VYSSDGKLIA
EFGEMRRSPI RFAEIPPQFI QALLSAEDDN FLNHYGVDPS SLMRAATQLV KTGHIQTGGS
TITMQVAKNF FLTSERSFSR KTNEILLALQ IERELTKDEI LELYVNKIYL GNRAYGIDAA
AQVYYGKSIR DVSLAQMAMI AGLPKAPSRF NPLANPVRAK ERRDWILGRM YKLGKIDQAS
YEAALAEPLN ASYHVPTPEV NAPYIAEMAR AEMVGRYGSD AYTEGFRVTT TVPSDMQEMA
NKAVLKGLSD YDERHGYRGP EARFPGRTQA AWLQELGKQR TLGGLEPAIV TQVEHTGLKV
LTRDGQEAQV AWDTMKWARP FINNNAQGRS PQSPADVAQV GDLVRLQRLD DGTLKFSQVP
VAQSALVTLD PNNGAIRALV GGFSFEQSNY NRAVQAKRQP GSSFKPFIYS AALDSGYTAS
SLVNDAPIVF VDESVDKVWR PKNDTNTFLG PIRMREALYK SRNLVSIRLL QAMGVDRTID
YIAKFGFNKQ DLPRNLSLAL GTATLTPMEI ATGWSTFANG GYKITPYLIE RIESRSGETL
FTANPARVPQ GAQDQAGLAA PEQPISTAAM PGEAPSAFSQ VAAAPQAPAV AEQIIDGRTT
YILTSMLQDV IKRGTGRRAL ALGRTDLAGK TGTTNESKDA WFSGYNADYV TTVWVGFDQP
ETLGRREYGG TAALPIWMNF MGAALKDKPA HAPAEPEGIL SLRVDPVSGR AASPSTPNAY
FELFKAEDSP PSVDELGNGA APGSPLPADE ATPMDLF
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