Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4946 |
Symbol | |
ID | 5192333 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 5560615 |
End bp | 5560962 |
Gene Length | 348 bp |
Protein Length | 115 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640589431 |
Product | hypothetical protein |
Protein accession | YP_001270250 |
Protein GI | 148550148 |
COG category | [S] Function unknown |
COG ID | [COG3111] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00156] conserved hypothetical protein TIGR00156 |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.638507 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATCC GTTATCTTGC CCTCATCCTC GCCCCCTTGT TCAGCGCTGG CGCATTTGCC GCTGGCTACA CCGGCCCTGG CGCCCAGTCG GTAACCACGG TTGCCGCCGC GAACGACGCC GCCGATGACA CCCCCGTCGT GCTGCAGGGC TTCGTGACCA AGAAGATCAA CAACGACGAC AAGTACGAGT TCAAGGACAA CACTGGCACC ATCACTGTCG AGATCGACGA TGAGGACCTG CCGCCGACGC CGTTCAACGA CAAGACCAAG GTGAAGCTGA CCGGTGAGGT GGAAAAGCAC CTGATGAGCC GGGAAGTGGA TGTGGATATT GTCGAGATCA TCAACTGA
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Protein sequence | MKIRYLALIL APLFSAGAFA AGYTGPGAQS VTTVAAANDA ADDTPVVLQG FVTKKINNDD KYEFKDNTGT ITVEIDDEDL PPTPFNDKTK VKLTGEVEKH LMSREVDVDI VEIIN
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