Gene Pput_4946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4946 
Symbol 
ID5192333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5560615 
End bp5560962 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content58% 
IMG OID640589431 
Producthypothetical protein 
Protein accessionYP_001270250 
Protein GI148550148 
COG category[S] Function unknown 
COG ID[COG3111] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00156] conserved hypothetical protein TIGR00156 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.638507 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCC GTTATCTTGC CCTCATCCTC GCCCCCTTGT TCAGCGCTGG CGCATTTGCC 
GCTGGCTACA CCGGCCCTGG CGCCCAGTCG GTAACCACGG TTGCCGCCGC GAACGACGCC
GCCGATGACA CCCCCGTCGT GCTGCAGGGC TTCGTGACCA AGAAGATCAA CAACGACGAC
AAGTACGAGT TCAAGGACAA CACTGGCACC ATCACTGTCG AGATCGACGA TGAGGACCTG
CCGCCGACGC CGTTCAACGA CAAGACCAAG GTGAAGCTGA CCGGTGAGGT GGAAAAGCAC
CTGATGAGCC GGGAAGTGGA TGTGGATATT GTCGAGATCA TCAACTGA
 
Protein sequence
MKIRYLALIL APLFSAGAFA AGYTGPGAQS VTTVAAANDA ADDTPVVLQG FVTKKINNDD 
KYEFKDNTGT ITVEIDDEDL PPTPFNDKTK VKLTGEVEKH LMSREVDVDI VEIIN