| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4915 |
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| Symbol | |
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| ID | 5192975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5514825 |
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| End bp | 5517275 |
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| Gene Length | 2451 bp |
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| Protein Length | 816 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640589400 |
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| Product | glycogen/starch/alpha-glucan phosphorylase |
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| Protein accession | YP_001270219 |
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| Protein GI | 148550117 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0058] Glucan phosphorylase |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02093] glycogen/starch/alpha-glucan phosphorylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.570439 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCAGG AACCCAAAGC ACGTGACGCC GAAGTCGCGG ATTTTCGCGC TGCTGTACTG
AACAAGCTGA CCTACGCGGT CGGCAAGGAC CCCGAGCACG CCTTCGACCA TGACTGGTTC
GAAGCCATTG CCCTGGCCGC GCGCGATCAC ATGGTCGACC ACTGGATGGA TCACACCCGG
CAGGCCTATC GGCGCAGCCA GAAGCGTGTC TACTACCTTT CCCTGGAGTT TCTCATCGGC
CGCTTGCTGT ACGACAGCCT GAGCAACCTG GGCCTGCTGG ACGTCGCCCG CGATGCGCTG
GAAGGGCTGA ATGTGGACCT CGAACGCATT CGCCTGCTCG AGCCGGACGC CGCGCTGGGC
AATGGTGGCC TTGGCCGTCT GGCTGCGTGC TTCATGGAGA GCATGTCTAC CCTGGGTATC
GCTGCCCATG GTTACGGCAT CCGCTACGAG CACGGGCTGT TCCGTCAGGC CGTGGTCGAT
GGCTGGCAGC AGGAACAGAC CGAGAACTGG CTGGATTTCG GCAACCCCTG GGAGTTCGAG
CGCGCCGAGG TGATCTACCC GATCAGCTTT GGCGGCAGTG TCGAAACGGT GCACGATGCA
AGCGGTAGCC AGCGCCAGGT ATGGTGGCCT GGCGAGACGG TGCGGGCGGT GGCCTACGAC
ACGCCGGTAG TCGGCTGGCG CGGATCCAGC GTCAACACCC TGCGCCTGTG GCGCGCGCGC
GCGCTGGAAG AGCTGCACCT GGAGCGCTTC AACGCCGGTG ACCATTTGGG GGCTGTGGCT
GAAGTGGCGC GTGCCGAGAG CATTTCGCGT GTGCTTTACC CCGCCGACAG TACCGAGGCC
GGTCAGGAAC TGCGCCTTCG CCAGGAGTAC TTTTTCGTCT CGGCTTCGCT GCAGGACTTG
CTGCGGCGCC ACCTGAACAT GCACAAGGAC CTGCTCAACC TGCCTGATGC AGCGGCCATC
CAGCTAAACG ACACCCATCC CTCGATTGCG GTGGCGGAGC TGATGCGGTT GCTGGTGGAT
CAGCACGAAG TGCCTTGGGA AAAGGCCTGG GAGCTGACCG TCGGCACGCT CGCCTACACC
AACCATACCC TGTTGCCAGA AGCCCTGGAA ACCTGGCCGG TAGCGCTGAT GGAGCGCATG
CTGCCGCGGC ACATGCAGAT TATCTACCTG ATCAATGCCT ACCATATCGA TGCGTTGCGG
GCCAAAGGCC TGCACGACTT CGACGTGCTG CGCGCGGTTT CGCTGATTGA GGAAGACAAC
GGCCGACGGG TGCGCATGGG CAATCTGGCG TTTCTCGGCT CGCACAGCGT CAACGGCGTG
TCGGCGCTGC ACAGCAAGTT GATGAAAAGC ACGGTGTTCT CCGAGCTGCA CAAGCTCTAC
CCGCAACGGA TCAACAACAA GACCAACGGC ATTACCTTCC GCCGCTGGTT GTACCAGTCC
AACCCTCAAC TGACCGAGAT GCTGGTCGAG GCGCTTGGGC CGGAACTCAA GGACGACCCA
CAGACGCGTC TGGCGGGCCT GGTGCCGTTC GCCGAAAAAG CCGGTTTCCG CAAGCAGTTC
GCTGCCCAGC GGCTGCACAG CAAGCGCGCC CTGGCCAGCA TCATTCAGGA TCGTATCGGC
GTCACGGTCA ACCCCGAGGC GCTATTCGAC GTTCAGGTCA AACGTATTCA CGAATACAAG
CGCCAGTTGC TCAACCTGCT GCACACCGTT GCACTGTACC AGGCCATACG CAACGACCCT
GGCACCAACT GGGTGCCGCG GGTGAAGATC TTCGCTGGCA AGGCTGCGGC CAGTTACCAC
CAGGCCAAAC TGATCATCAA GCTGGCCAAC GACATCGCCC GTGTGGTGAA CAACGACCCG
ACGGTGCGCG GCCTGCTGAA GGTGGTGTTC CTGCCCAACT ACAACGTCAG CCTGGCCGAG
AGCATCATCC CGGCGGCGGA CCTTTCCGAG CAGATATCCA CCGCAGGTTA CGAAGCTTCC
GGTACCAGTA ACATGAAGTT CGGCCTCAAT GGTGCGCTGA CCATCGGCAC CCTGGATGGT
GCCAATGTGG AGATGTGCGA ACAGGTGGGG GCCGACAACA TGTTCATCTT TGGCCTGACC
GCGCAGCAGG TTGAAGCGCG CAAGCGTGCC GGTGATTTTG GCGCCAATGC CGCCATAGCT
GCTTCCAACC GCTTGACCGA TGTGTTGCAG GCCATTCGCA GTGGTGTGTT CTCGCCAGAC
GACCCTTCTC GGTACACCGG GTTGATCGAC GGCCTGGTGG CCTACGATCG CTTCCTGGTG
TGTGCCGATT TCGATGCCTA CTGGGATGCC CAGCGGCGGG TCGAGGATCT GTGGCACACA
CCGCAGGAGT GGTGGCGCAA GGCGGTGCTC AATACCGCGC GGATGGGCTG GTTCTCCTCG
GATCGGACTA TTCGCGAGTA TGCGACCGAG ATCTGGAAGG CGCTGGACTG A
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| Protein sequence | MSQEPKARDA EVADFRAAVL NKLTYAVGKD PEHAFDHDWF EAIALAARDH MVDHWMDHTR
QAYRRSQKRV YYLSLEFLIG RLLYDSLSNL GLLDVARDAL EGLNVDLERI RLLEPDAALG
NGGLGRLAAC FMESMSTLGI AAHGYGIRYE HGLFRQAVVD GWQQEQTENW LDFGNPWEFE
RAEVIYPISF GGSVETVHDA SGSQRQVWWP GETVRAVAYD TPVVGWRGSS VNTLRLWRAR
ALEELHLERF NAGDHLGAVA EVARAESISR VLYPADSTEA GQELRLRQEY FFVSASLQDL
LRRHLNMHKD LLNLPDAAAI QLNDTHPSIA VAELMRLLVD QHEVPWEKAW ELTVGTLAYT
NHTLLPEALE TWPVALMERM LPRHMQIIYL INAYHIDALR AKGLHDFDVL RAVSLIEEDN
GRRVRMGNLA FLGSHSVNGV SALHSKLMKS TVFSELHKLY PQRINNKTNG ITFRRWLYQS
NPQLTEMLVE ALGPELKDDP QTRLAGLVPF AEKAGFRKQF AAQRLHSKRA LASIIQDRIG
VTVNPEALFD VQVKRIHEYK RQLLNLLHTV ALYQAIRNDP GTNWVPRVKI FAGKAAASYH
QAKLIIKLAN DIARVVNNDP TVRGLLKVVF LPNYNVSLAE SIIPAADLSE QISTAGYEAS
GTSNMKFGLN GALTIGTLDG ANVEMCEQVG ADNMFIFGLT AQQVEARKRA GDFGANAAIA
ASNRLTDVLQ AIRSGVFSPD DPSRYTGLID GLVAYDRFLV CADFDAYWDA QRRVEDLWHT
PQEWWRKAVL NTARMGWFSS DRTIREYATE IWKALD
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