| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4905 |
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| Symbol | |
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| ID | 5193038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5503863 |
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| End bp | 5505266 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640589390 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001270209 |
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| Protein GI | 148550107 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.963785 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACAAG CTCAAGGTCT CAAGCGCGGG CTAAGTGCCC GCCACATCCG TTTCATGGCC
CTCGGCTCCG CCATCGGCAC CGGCCTGTTC TACGGTTCTG CCTCGGCCAT CCAGATGGCA
GGCCCGGCCG TGCTGCTGGC CTACCTGATC GGCGGCGCCG CCGTGTTCAT GGTCATGCGC
GCCCTTGGCG AAATGGCCGT GCACAACCCG GTGGCCGGCT CCTTCGGCCA CTACGCCACG
ACCTACCTCG GCCCCATGGC CGGTTTCATC CTTGGCTGGA CCTACGCTTT CGAGATGGTC
ATCGTCGCCA TCGCCGACGT CACCGCGTTC GGTATCTACA TGGGCTTCTG GTTCCCGGAG
GTAGCCCGCT GGATCTGGGT GCTGGGCATC GTTTTCCTGA TCGGCGGCCT CAACCTGTGC
AACGTCAAGG TATTCGGCGA AATGGAATTC TGGTTGTCGC TGCTCAAGGT CGGCGCCATC
GTGGCGATGA TCCTGGCCGG CCTCGGCATC ATGGCCTTCG GTTTCAGCCA GGTGGGTACC
GGGCATGCCG TAGGCATGAG CAACCTGTTC GACCACGGCG GCTTCATGCC TAACGGCGTG
GGGGGCTTGA TTGCGTCGTT TGCCGTGGTG ATGTTCGCCT TCGGCGGTAT CGAGATCATC
GGCGTCACCG CCGGTGAGGC AAAAGACCCG CAGCGCGTCA TTCCCAAAGC GATCAACGCG
GTGCCACTGC GTATCCTGCT GTTCTACGTG CTCACCCTGT TCGTGCTGAT GTGCCTGTAC
CCATGGCCGC AGATCGGTAG CCAGGGCAGC CCGTTCGTGC AGATCTTCAG CAACCTGGGC
ATTGGCTCTG CCGCTGCCGT GCTGAACGTC GTGGTGATTT CCGCTGCCAT CTCTGCCATC
AACAGCGACA TCTTTGGCGC TGGCCGCATG ATGTATGGCC TGGCCCAGCA AGGCCACGCC
CCGCGCGGCT TCAGCAAGTT GTCGAAACAT GGCGTACCGT GGATGACCGT CGTGGTGATG
GGGGCTGCGC TGCTGATCGG CGTATTGCTC AACTACCTGA TCCCGGAAAA TGTGTTCCTG
CTGATTGCCT CGATCGCCAC CTTCGCCACG GTGTGGGTGT GGCTGATGAT CCTGCTCACC
CAGGTAGCCA TGCGCCGCAG CATGAGCCGC GAGGAAGTGG CACAGCTCAA GTTCCCGGTA
CCGTTCTGGC CATACGGCCC GGCCATGGCC ATTGCGTTCA TGGTGTTCAT CTTTGGCGTG
CTCGGTTACT TCCCGGACAC CCAGGCGGCA TTGATCGTCG GCGTGATCTG GGTGGTGTTC
CTGGTGGCGT CCTACCTGCT GTGGTGCAAG CCGCGCGCAG GGCAGGGCCA GCCGGTAGCG
GAGCCGGCAG AGTTGCACCG CTAG
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| Protein sequence | MQQAQGLKRG LSARHIRFMA LGSAIGTGLF YGSASAIQMA GPAVLLAYLI GGAAVFMVMR
ALGEMAVHNP VAGSFGHYAT TYLGPMAGFI LGWTYAFEMV IVAIADVTAF GIYMGFWFPE
VARWIWVLGI VFLIGGLNLC NVKVFGEMEF WLSLLKVGAI VAMILAGLGI MAFGFSQVGT
GHAVGMSNLF DHGGFMPNGV GGLIASFAVV MFAFGGIEII GVTAGEAKDP QRVIPKAINA
VPLRILLFYV LTLFVLMCLY PWPQIGSQGS PFVQIFSNLG IGSAAAVLNV VVISAAISAI
NSDIFGAGRM MYGLAQQGHA PRGFSKLSKH GVPWMTVVVM GAALLIGVLL NYLIPENVFL
LIASIATFAT VWVWLMILLT QVAMRRSMSR EEVAQLKFPV PFWPYGPAMA IAFMVFIFGV
LGYFPDTQAA LIVGVIWVVF LVASYLLWCK PRAGQGQPVA EPAELHR
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