Gene Pput_4889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4889 
SymbolhisE 
ID5190895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5485467 
End bp5485802 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content59% 
IMG OID640589374 
Productphosphoribosyl-ATP pyrophosphatase 
Protein accessionYP_001270193 
Protein GI148550091 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0140] Phosphoribosyl-ATP pyrophosphohydrolase 
TIGRFAM ID[TIGR03188] phosphoribosyl-ATP pyrophosphohydrolase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.327641 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACA CCCTCAACCG CCTGGCCGAA GTGCTTGAAG AACGCAAGCA AGCGGCGCCT 
GACAGCTCCT ACGTGGCCAG CCTGTACCAC AAGGGCCTGA ACAAGATCCT TGAAAAGCTC
GGCGAAGAGT CGGTCGAAAC GATCATTGCT GCCAAGGATG CCCAGATCAG CAAGGATTAC
AGCGATGTCA TCTACGAAAC CGCCGACCTG TGGTTTCATA GCCTGGTGAT GCTCAGTGCG
CTGGGCCAGC ATCCGCAAGC CGTGCTGGAT GAGCTGGAAC GCCGCTTCGG GCTTTCCGGG
CATGATGAAA AGGCCGCACG CCAGCCTTCG GCTTGA
 
Protein sequence
MSDTLNRLAE VLEERKQAAP DSSYVASLYH KGLNKILEKL GEESVETIIA AKDAQISKDY 
SDVIYETADL WFHSLVMLSA LGQHPQAVLD ELERRFGLSG HDEKAARQPS A