Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4886 |
Symbol | |
ID | 5190310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 5482758 |
End bp | 5483381 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640589371 |
Product | hypothetical protein |
Protein accession | YP_001270190 |
Protein GI | 148550088 |
COG category | [S] Function unknown |
COG ID | [COG3165] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.8199 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTGCTGG CCGGGCTGCT CGCCAGCGTC GAACATGGCC TGAACCGCGT CCTGCGCCTG GACAGCACGG CCCTGCCGCG GCTGGCCGCG CTGGAAGGCA AAGTCATCGA GATCGACTGC CGCCAACCGG CCCTGCAGGT GTTTATCCTG CCCGATGAAG AAGGCCTGAT GCTCGCCGCC CATTGGGAGG GCGAGGTCGA CTGCCGCCTG CGCGCCCCCG CCGGTAGCCT GGCGCAACTG GCCTTGGTCA AGGACAAGAC CGCTGTACTG CACAGCCCGC AGGTCGAGCT GCACGGCGAC AGCGCCGTAC TGCTCGACCT GTTCGGTGTG CTGCAGGACC TGGAGCTGGA CTGGGAGCAC GAGCTGCAAC GCTGGCTTGG CCCGGTCGCC ACGGCAATGC TGGCCGGCCA TATCCGCCTG CGCGCTCGCT GGACTCGCCA AGGCCTGGCA CGTTTCAGCC AGAACCTGTC CGAATACCTG GCCGAAGAAT CCCGTACCCT GGTCGGCAAG CGCGAAGCCG AAGCCGCCTT CAGCGAGCTC GATGCCTTGA AGCTTGATAC AGAACGCCTC GAAGCGCGCC TCAAGCGCCT CTCCCGATCC CTTGATACCA GCGATAACGC ATGA
|
Protein sequence | MLLAGLLASV EHGLNRVLRL DSTALPRLAA LEGKVIEIDC RQPALQVFIL PDEEGLMLAA HWEGEVDCRL RAPAGSLAQL ALVKDKTAVL HSPQVELHGD SAVLLDLFGV LQDLELDWEH ELQRWLGPVA TAMLAGHIRL RARWTRQGLA RFSQNLSEYL AEESRTLVGK REAEAAFSEL DALKLDTERL EARLKRLSRS LDTSDNA
|
| |