| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4873 |
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| Symbol | pyrC |
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| ID | 5192719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5465844 |
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| End bp | 5467115 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640589358 |
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| Product | dihydroorotase |
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| Protein accession | YP_001270177 |
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| Protein GI | 148550075 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0044] Dihydroorotase and related cyclic amidohydrolases |
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| TIGRFAM ID | [TIGR00857] dihydroorotase, multifunctional complex type |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.423102 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0991543 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCATCA GTATTCTTGG CGCCCGGGTG ATCGACCCCA ACAGTGGCCT GGACCAGGTC
ACCGACCTGC ACCTGGACGG CGGCCGCATT GTCGCCATCG GCGCCGCACC GGCTGGTTTC
AGCGCCAGCC GCACGATCCA GGCTGATGGC CTGGTCGCTG CGCCCGGCCT GGTCGACCTG
GGCGTGTCCC TGCGCGAGCC GGGTTACAGC CGCAAAGGCA ACATCGCCAG TGAAACCCGC
GCTGCCGTTG CCGGCGGTGT CACCAGCCTG TGCTGCCCGC CGCAGACCAA GCCGGTGCTG
GACACCTCGG CGGTAGCCGA ACTTATCCTT GACCGCGCCC GCGAAGCCGC CAACAGCAAG
GTCTACCCGG TCGGCGCCCT GACCAAGGGC CTGGAGGGCG AGCAACTGGC CGAACTGGTG
GCCCTGCGTG ACACCGGTTG CGTAGCGTTT GGCAACGGCC TGAAGGAAAT CCCCAACAAC
CGTACCCTGG CCCGCGCCCT GGAGTATGCC GCCACCTTCG ACCTGACGGT GGTGTTCCAC
TCCCAGGACC GCGATCTGGC CCAGGGCGGC CTGGCCCACG AAGGTGCCAT GGCCAGCTTC
CTCGGGCTGC CGGGCATCCC GGAAAGCGCC GAAACCGTGG CCCTGGCGCG CAACCTGCTG
CTGGTGGAAC AGAGCGGTGT GCGTGCGCAC TTCAGCCAGA TCACCAGCGC CCGTGGCGCG
CGGCTGATCG CCCAGGCCCA GGCCTTGGGC CTGCCTGTGA CCGCCGATGT AGCGCTGTAC
CAGCTGATCC TCACGGACGA GTCGCTGCGC GAGTTCTCCA GCCTGTACCA CGTGCAGCCG
CCGCTGCGCA CCGCTGCCGA CCGTGACGGA TTGCGCGAGG CGGTGAAGTC GGGGGTGATC
CAGGCCATCT CCAGCCACCA CCAGCCGCAC GAGCGCGACG CCAAGCTGGC CCCGTTCGGC
GCCACCGAGC CGGGTATCAG CAGCGTCGAG TTGCTGCTGC CACTGGCCAT GACCCTGGTG
CAAGACGGCC TGCTCGACCT GCCGACCTTG CTGGCCCGTC TGAGCAGCGG CCCGGCTGCC
GCCCTGCGCC TGCCGGCTGG GGAGCTGAAA GTGGGTGGCG CGGCCGACCT GGTGCTGTTC
GACCCGCAAG CGTCCACCGT TGCTGGCGAA CAATGGTTCT CCCGTGGCGA GAACTGCCCG
TTCATCGGCC ACTGCCTGCC AGGTGCAGTG CGTTATACCT TGGTCGATGG CCACGTCTGC
CACGAGGCCT GA
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| Protein sequence | MTISILGARV IDPNSGLDQV TDLHLDGGRI VAIGAAPAGF SASRTIQADG LVAAPGLVDL
GVSLREPGYS RKGNIASETR AAVAGGVTSL CCPPQTKPVL DTSAVAELIL DRAREAANSK
VYPVGALTKG LEGEQLAELV ALRDTGCVAF GNGLKEIPNN RTLARALEYA ATFDLTVVFH
SQDRDLAQGG LAHEGAMASF LGLPGIPESA ETVALARNLL LVEQSGVRAH FSQITSARGA
RLIAQAQALG LPVTADVALY QLILTDESLR EFSSLYHVQP PLRTAADRDG LREAVKSGVI
QAISSHHQPH ERDAKLAPFG ATEPGISSVE LLLPLAMTLV QDGLLDLPTL LARLSSGPAA
ALRLPAGELK VGGAADLVLF DPQASTVAGE QWFSRGENCP FIGHCLPGAV RYTLVDGHVC
HEA
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