Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4858 |
Symbol | |
ID | 5194582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 5448958 |
End bp | 5450364 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640589343 |
Product | adenosylmethionine--8-amino-7-oxononanoate transaminase |
Protein accession | YP_001270162 |
Protein GI | 148550060 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase |
TIGRFAM ID | [TIGR00508] adenosylmethionine-8-amino-7-oxononanoate transaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.401144 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.146487 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCCTCA ATGATCAGTG GATGCAACGC GACCTCAAGG TCCTGTGGCA CCCCTGTACC CAGATGAAAG ACCACGAGCA GCTGCCGCTG ATCCCAATCA AGCGCGGCGA AGGCGTGTGG CTGGAAGACT TCGAGGGCAA ACGCTATCTG GATGCGGTGA GCAGTTGGTG GGTCAACGTC TTCGGCCATG CCAACCCGCG CATCAACCAG CGCATCAAGG ACCAGGTCGA CCAGCTCGAG CACGTGATCC TGGCCGGTTT CAGTCATCAG CCAGTGATCG AGCTGTCCGA GCGCCTGGTC GCCATGACCC CGGCCGGTCT CGACCGGGTG TTCTATGCCG ACAATGGCTC GTCGTGCATC GAGGTGGCGC TGAAGATGAG CTTCCACTAC TGGCAGAACA TCGGCAAACC GGACAAGAAG CGCTTCGTCA CCCTGACCAA CAGCTACCAT GGCGAAACCA TTGCCGCCAT GTCGGTGGGT GATGTGCCGC TGTTCACCGA AACCTACAAG GCGCTGCTGC TCGACACCCT CAAGGTGCCA AGCCCTGACT GCTACCTGCG CCCCGAGGGC ATGAGCTGGG AAGAGCACTC GCGCAACATG TTCCAGGCCA TGGAGCAGAC CCTGGCTGAA CACCACGCCT CGATCAGCGC TGTGATCGTC GAGCCGCTGA TACAGGGTGC CGGTGGCATG CGCATGTACC ACCCGGTGTA CCTCAAGTTG TTGCGCGAGG CCTGCGACCG CTACGACGTG CATCTGATCC ATGACGAGAT CGCCGTGGGC TTCGGCCGCA CCGGCACGAT GTTCGCCTGC GAGCAAGCCG GCATCCGCCC GGATTTCCTG TGCCTGTCCA AGGCCCTGAC CGGCGGCTAC CTGCCGCTGG CCGCCTGCCT GACCACCGAC AAGGTGTACC AGGCGTTCTA CGACGACTAC CCGACACTGC GCGCGTTCCT GCACTCGCAC AGCTACACCG GCAACCCGCT GGCGTGCGCT GCAGCGCTGG CGACCCTGGA TATCTTCGAG CAGGACAACG TGATCGAGGC CAACAAGGCC CTGGCCACGC GCATGGCCAC AGCCACTGCA CATTTGGCCG ATCATGCTCA TGTTGCCGAA ATACGCCAGA CTGGCATGGC CCTGGCCATC GAAATGGTTC AAGACAAGGC AGGCAAGGTT GCCTACCCCT GGCAGGAGCG CCGTGGCCTG AAGGTGTTCG AGCACGCCCT GACCCGCGGC GCCCTGCTGC GACCGCTGGG CAGCGTGGTG TATTTCCTGC CGCCGTACGT GATCACCCCC GAGCAGATCG ACTTCCTTGC CGAAGTGGCC AGCGAAGGCA TCGATATCGC CACCCGCGAC AGCATCAGTG TCGCAGTGCC GGCCAACTTC CACCCCGACT TCCGCGACCC GGGCTAG
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Protein sequence | MGLNDQWMQR DLKVLWHPCT QMKDHEQLPL IPIKRGEGVW LEDFEGKRYL DAVSSWWVNV FGHANPRINQ RIKDQVDQLE HVILAGFSHQ PVIELSERLV AMTPAGLDRV FYADNGSSCI EVALKMSFHY WQNIGKPDKK RFVTLTNSYH GETIAAMSVG DVPLFTETYK ALLLDTLKVP SPDCYLRPEG MSWEEHSRNM FQAMEQTLAE HHASISAVIV EPLIQGAGGM RMYHPVYLKL LREACDRYDV HLIHDEIAVG FGRTGTMFAC EQAGIRPDFL CLSKALTGGY LPLAACLTTD KVYQAFYDDY PTLRAFLHSH SYTGNPLACA AALATLDIFE QDNVIEANKA LATRMATATA HLADHAHVAE IRQTGMALAI EMVQDKAGKV AYPWQERRGL KVFEHALTRG ALLRPLGSVV YFLPPYVITP EQIDFLAEVA SEGIDIATRD SISVAVPANF HPDFRDPG
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